Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03029 ATGGAGGGTGGCGGTTTGACGGTTTCAACGGACTTAACACTTCCAAACAACCCTTCAGGCTATCCATGCAAATCAGCATCAGTTGTAACAGTGAATGACTTTGTATTCTCTAACTTTGTACCTGGAAATACAATAACACCTTTTAATGTTGAAGCAACATTTGCATCTGTAACTAACTTCCCAGGTGTCAATGGACTTGGTATCTCTGCAGCAAGAGTAGACATGAATATGAATGAATCTGTTCCAATGCACACACATTCTGATGCAACTGAATTACTATTCATGATTCAAGCTCAATTGATTTCTGGATTTATCACACCAACAGATGTTTTTGTGAAAACAATTAGTCCTGGTGATGTTATGGTATTTCCACAAGGACTATTGCATTTTCAAGTTAACTCTGGACCTGGAAAAGCTATTGCTTTTTCTGCTTATACTAGCTCAAATCCTAGCTTGCAAATACTTGATGATCTATTGTTTAGCAACAACTTATCAACTTCCTTAATTTCACAAACTACTTTTCTTGATTCTTCACAAATTAGGAAGCTTAAGGCTCTGTTTGGTGGCACTGACTAG 576 0.3733 MEGGGLTVSTDLTLPNNPSGYPCKSASVVTVNDFVFSNFVPGNTITPFNVEATFASVTNFPGVNGLGISAARVDMNMNESVPMHTHSDATELLFMIQAQLISGFITPTDVFVKTISPGDVMVFPQGLLHFQVNSGPGKAIAFSAYTSSNPSLQILDDLLFSNNLSTSLISQTTFLDSSQIRKLKALFGGTD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03029 191 Gene3D Jelly Rolls 8 191 IPR014710 -
Car07g03029 191 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 12 187 - -
Car07g03029 191 SUPERFAMILY RmlC-like cupins 12 185 IPR011051 -
Car07g03029 191 SMART Cupin_1_3 37 181 IPR006045 -
Car07g03029 191 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 12 187 - -
Car07g03029 191 CDD cupin_OxOx 11 187 - -
Car07g03029 191 Pfam Cupin 39 180 IPR006045 -
Car07g03029 191 PRINTS Germin signature 84 104 IPR001929 GO:0030145
Car07g03029 191 PRINTS Germin signature 113 133 IPR001929 GO:0030145
Car07g03029 191 PRINTS Germin signature 146 161 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03029 Car-Chr7 57116651 57118949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03029 11 190 Miscellaneous Gene Families AT1G72610 47.802 1.16e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03029 - - cam:101508818 357.836