Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03022 ATGGCGGTTTCAACTATAGCTTTATACGCGAGTCCACCGAGTAGTGTATGTTCAACACCGCATCCATGTCAGATTAATACTCACGCTTCTTATGATTTCGAATTAGGATCTAGATCTTCATCACCGGCGTCGACGGCGACGGCATCGACGTCGACGAAGCCGGTGATGGGAGGTCTTTCGTTTTTATTCTCATCTCCGTCGGCGGTGAAACATGTTCCGTTAACTTCAAGCTTTTCCGGCGGCGGTGAAGATGATGAATTGAAGGAGCTGAGTAGTTCGTTTTCTTATTCTCCGAACAAATTCGGTGGATCATGGAAGAGGGATCATCATCAGATTCAGAGTCCAGTTTCTGTTTTTCAGTGTCCAGTTTCGTGCAGTAGTAGTATGGGTACATTTCGTCCGATGAGGAGTGGTAGTGGTGGGTTATTTGATGGGTTTGTGAGGAGTGCTTTGGGTTCTTCTTGTTTGGATTATTTTGATTCTGCTGGTGTTAATGTTGTTCGCGGTGGTGTTGGGTTTGATGGTAGTTCTTCTTCTGGAGTTGTTGATGAGTTGACTTTTAATTTGGAAGATACTTTTGTGGAGCCTTGCTTTGGTTTTGAGTTTGAGCCTTATGCTAAGAAGTTGTTGATGAGTGCTCAGTTGAGACACAAGATCTTTTGTGAAGAGTTTGTTATTAAGGCTTTCTTTGAAGCTGAGAAAGCACATAGAGGCCAGATGAGAGCTAGTGGGGATCCTTATTTGCAGCATTGTTTGGAAACTGCTGTGTTACTGGCTTTGATTGGTGCGAATTCGACTGTTGTAGTTGCAGGGCTTTTGCATGATACTCTTGACGATGCATTTCTCACTTACGATTATATATTTGGGACGTTTGGAGCTGGCGTTGCTGATTTAGTTGAAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGACAATAATACAGCTAGCAAATCTGTTGAAGCTGACCGTTTGCATACAATGTTCCTTGCCATGGCAGATGCAAGAGCTGTCCTAATTAAATTGGCAGATCGATTACACAATATGATGACTCTAGATGCATTACCGGTTGCCAAGCAGCAGAGATTTGCAAAGGAGACTTTGGAGATTTTTGCACCTTTGGCCAATCGCTTAGGAATATCTAATTGGAAGGAACAATTAGAGAATTTATGTTTTAAGCATCTCAACCCAGTGCAGCACATGGAGCTTTCGTCAAAGCTTGTGGAATCGTATGATGATGCAATGATTGCTTCTGCAATTGAGAGATTAGAGCAAGCACTTAAAGATGAATGCATATCTTATCATGTGATTTCTGGGCGGCATAAGAGCTTGTATAGCATTTATTGCAAAATGTTAAAGAAGAAACTAACCATAGATGATATCCATGACATTAATGGGCTGCGCTTGATTGTTGAGAAGGAGGAAGACTGTTACAAAGCCTTAAAAGTTGTTCACCAGTTATGGTCCGAGGTACCTGGAAAACTGAAAGACTACATATGTTGCCCCAAGTTCAATGGGTATCAATCTCTCCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTCGAAGTACAAGTTCGAACAAAAGATATGCATTTACAAGCTGAATTTGGATTTGCAGCTCATTGGAGGTACAAGGAAGATCACTGTCAGCATTCTTCTTATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGTGAAACAATGAGCAAAGATTCTACTTCTGTTGGATATGTCGATTCAATCAAGCCACCTTGCAAGTTCCCTTCGCATGCTGAGAATTGTCCATATTCTTACAAGCCTGATTGTGGGCAGGATGGGCCTGTGTTTGTTATCATGATTGAGAACGATAAGATGTCTGTCCAAGAATTTTGTGCAAACTCAACAGTTCTGGATTTGTTGGAGAGAGCCGGGCGTGCAAGCTCTAGGTTGACAACTTATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGATTGAATCACAAGGCTGTAAGTGATCCAAATTGCAAGTTGAAGATGGGAGATGTGGTCGAGCTTACACCGGCCATACCTGACAAGTCTCTGACTGAATATAGGGAAGAAATCCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAACTCCTGCTACTGCAAGCAGCATGGTTGGAACTAGTTGA 2187 0.4321 MAVSTIALYASPPSSVCSTPHPCQINTHASYDFELGSRSSSPASTATASTSTKPVMGGLSFLFSSPSAVKHVPLTSSFSGGGEDDELKELSSSFSYSPNKFGGSWKRDHHQIQSPVSVFQCPVSCSSSMGTFRPMRSGSGGLFDGFVRSALGSSCLDYFDSAGVNVVRGGVGFDGSSSSGVVDELTFNLEDTFVEPCFGFEFEPYAKKLLMSAQLRHKIFCEEFVIKAFFEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVVAGLLHDTLDDAFLTYDYIFGTFGAGVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGISNWKEQLENLCFKHLNPVQHMELSSKLVESYDDAMIASAIERLEQALKDECISYHVISGRHKSLYSIYCKMLKKKLTIDDIHDINGLRLIVEKEEDCYKALKVVHQLWSEVPGKLKDYICCPKFNGYQSLHTVVMGEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQHSSYVLQMVEWARWVVTWQCETMSKDSTSVGYVDSIKPPCKFPSHAENCPYSYKPDCGQDGPVFVIMIENDKMSVQEFCANSTVLDLLERAGRASSRLTTYRFPLKEELRPRLNHKAVSDPNCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTPATASSMVGTS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03022 728 SUPERFAMILY HD-domain/PDEase-like 207 398 - -
Car07g03022 728 Pfam HD domain 232 382 - -
Car07g03022 728 Gene3D Hypothetical protein af1432 206 398 - -
Car07g03022 728 ProSiteProfiles HD domain profile. 247 351 IPR006674 -
Car07g03022 728 SUPERFAMILY Nucleotidyltransferase 388 577 IPR043519 -
Car07g03022 728 SMART RelA_SpoT_2 441 551 IPR007685 GO:0015969
Car07g03022 728 Pfam Region found in RelA / SpoT proteins 441 550 IPR007685 GO:0015969
Car07g03022 728 CDD HDc 245 373 IPR003607 -
Car07g03022 728 Gene3D Beta Polymerase, domain 2 402 531 IPR043519 -
Car07g03022 728 CDD NT_Rel-Spo_like 421 539 IPR007685 GO:0015969
Car07g03022 728 SMART hd_13 243 360 IPR003607 -
Car07g03022 728 PANTHER - 1 720 - -
Car07g03022 728 ProSiteProfiles S4 RNA-binding domain profile. 665 701 - -
Car07g03022 728 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 1 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03022 Car-Chr7 57067862 57072776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03022 242 548 EF-hand Containing Proteins AT3G17470 30.606 3.83e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03022 K00951 - gmx:100787301 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03022 07 57067862 57072776 Car07g03022 07 57067862 57072776 ECH