Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g03019 ATGGCACTTACAAATGAAATCATGGGTTCTTCATTGGTAGAAAGATCTTTGTTTCCTTCGTCTTCACCAAGTTTTCAACAGAAACGTGGAAGTTTCTTGATCAACCCTGTTTTGGTTCCTTTAGGAAACAGAAGAGTTTTGAAATTGAGAAAATCTGCTAAGTTTCCTGTTGCAGCTATAAGTGAGGATTTGGTGAAGGGTTCATCTTCTTCTTTGTCATCGTCATCAtcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctGTTCCTGAAGAGAAACCAGTGAAATTCAAAGTTAGAGGTGTTGTGACAATAAGGAACAAGATCAAAGAGGATTTCAAAGAGACTTTTGTTAAACATCTTGATGCTTTAACTGATAGGATTGGAAGAAATGTTGTTCTTGAACTTTATAGCACTGAGATGGATCCAAAAACAAAAGCTGCAAAGAAGAGTAGTGAAGCAGTGTTGAAGGATTGGTCAAAGAAGACAAACATTAAGGCAGAGAGAGTGAATTACATAGCTGAATTCATAGTGGATTCAAGTTTTGGAGAGCCAGGAGCTATTACTATTATAAACAATCATCAACAAGAATTTTACTTGGAAAGTATAACCCTTGAAGGATTTGCAACTGGACCAGTTCATTTCCCTTGCAACTCTTTTGTTCAAGCCAGAAAAGATCTTCCTGGAAAGAGGATTTTCTTTTCTAATAAGGCTTATTTACCGGATGATACACCTGCTGGGATTAAAACTTTGagagagaaagagctgagaaatttgagaggtgatggaagtggagttagaaaattatctgacagaatttatgactatgatacatacaatgatttgggaaatccagatagaggaattgaatttgcaagaccaacacttggtggatctgaaatgtatccatacccaagacggtgtcgtactggccgtggaccatctgatacagATATAACCGCTGAGAGTCGTGTAGAGAAGCCACATCCTATGTACGTACCAAGAGATGAACGGTTTGAGGAATCAAAACAGAACACATTTTCAGTGAAGAGGCTAAAGGCAGTGCTACATAACTTGCTTCCTGGCCTTAAATCAAGTCTTTCTGCTCACAACCAAGATTTCAATGACTTTTCAGATGTTGATGGCCTTTACAGTGTAGGGTTACTCATTAAGTTGGGTTTGCAAGATGATGTTTTGAAGAAATTACCATTACCTAAAATTTTTAGCAAAATTCAAGAATCTAGCCAGGGTCTTCTAAAGTATGACACTCCCAAAATTATATCAAAGGATAAATTTGCTTGGTTGCGAGATGACGAATTTGCCCGTCAAGCAATAGCAGGAGTTAACCCTGTTACAATTCAGAGCCTTAAAGTTTTCCCACCTGTTAGTAAATTAGATCCTGAAATCTATGGTCCACAAGAATCTGCTCTTAAAGAAGAGCACATTTTAAGCCAACTTAATGGCATGACTGTCCAACAGGCACTTGATGAGAATAAGCTGTTTATAATAGATTATCATGATATCTATCTTCCATTTCTTGAAAGGATCAATGCATTGGATGGTAGAAAATCATATGCCACACGTACCATATACTACCTGACACCCCTTGGGACTCTAAAACCTGTTGCTATTGAACTTAGCCTGCCACCATCTGGACCAAATACACCATCAAAACGTGTAGTTACACCTCCTTTAGATGCAACTACTAATTGGATGTGGATGCTTGCTAAGGCCCATGTTTGCTCCAATGATGCTGGTGTGCATCAACTTGTCAACCATTGgttacgcacacatgcttgcatggaaccatttatattatctgctcataggcaattaagtgcaatgcatccaatattcaaattattggatccacacatgaggtacactttggagatcaatgctttagctcgccagagtttgatcaatgcagatggtgtcattgaGTCTTGTTTCACTCCTGGTCGATATGGCATGGAGATTAGTTCTGCTGCTTACAAAAGCTTTTGGCGTATTGACAAAGATAGTCTCCCTGAAGATCTCATCCGCAGAGGAATGGCAGTACCTGACCCAACACAAccatatggtctaaagctagtgatgaaagattacccttatgcagaagatggtctattaatctggtttgcaatagaaaattgggttcgtacctatgtcaactattactatccaaacccaactatattatgcaatgatagagagttacaagcttggtactctgaatcaatcaatgtgggccatgctgatttaaagaatgaaacatggtggcccaaattggacaacactgaaagtcttgtctcagtcttaacaatcttaatttggaattcttctgcacaacatgctgcacttaactttggacaatacccttatggcggctatgtgccgaatcgtccaccgttgatgagaagattggtaccagaAGAGTCTGACCCTGAATATACAAGCTTTTTATCTGATCCACAAAAGTATTTCCTCAATGCATTGCCTAGTTTGTTGCAGGCTTCCAAATATATGGCTGTTGTCGATACACTTTCGACTCATTCGCCCGACGAAGAGTATTTGGGTGAGAGGCAACAGCCTTCTATTTGGTCAGGTGATGCTGAGATTGTTGAGAAGTTTTATGAATTCTCTGCTGAAATTGGAAAGATTGAGAAGGTTATTGATAGTAGGAACTCTGATAGGAATTTGAAGAACCGTTGTGGTGCTGGTGTTTTACCTTATGAGTTGCTTGCTCCTAGTTCTGAACCTGGTGTTACATGCAGAGGGGTTCCAAATAGTGTGTCTACATAA 2955 0.2717 MALTNEIMGSSLVERSLFPSSSPSFQQKRGSFLINPVLVPLGNRRVLKLRKSAKFPVAAISEDLVKGSSSSLSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPEEKPVKFKVRGVVTIRNKIKEDFKETFVKHLDALTDRIGRNVVLELYSTEMDPKTKAAKKSSEAVLKDWSKKTNIKAERVNYIAEFIVDSSFGEPGAITIINNHQQEFYLESITLEGFATGPVHFPCNSFVQARKDLPGKRIFFSNKAYLPDDTPAGIKTLREKELRNLRGDGSGVRKLSDRIYDYDTYNDLGNPDRGIEFARPTLGGSEMYPYPRRCRTGRGPSDTDITAESRVEKPHPMYVPRDERFEESKQNTFSVKRLKAVLHNLLPGLKSSLSAHNQDFNDFSDVDGLYSVGLLIKLGLQDDVLKKLPLPKIFSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQAIAGVNPVTIQSLKVFPPVSKLDPEIYGPQESALKEEHILSQLNGMTVQQALDENKLFIIDYHDIYLPFLERINALDGRKSYATRTIYYLTPLGTLKPVAIELSLPPSGPNTPSKRVVTPPLDATTNWMWMLAKAHVCSNDAGVHQLVNHWLRTHACMEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGVIESCFTPGRYGMEISSAAYKSFWRIDKDSLPEDLIRRGMAVPDPTQPYGLKLVMKDYPYAEDGLLIWFAIENWVRTYVNYYYPNPTILCNDRELQAWYSESINVGHADLKNETWWPKLDNTESLVSVLTILIWNSSAQHAALNFGQYPYGGYVPNRPPLMRRLVPEESDPEYTSFLSDPQKYFLNALPSLLQASKYMAVVDTLSTHSPDEEYLGERQQPSIWSGDAEIVEKFYEFSAEIGKIEKVIDSRNSDRNLKNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g03019 984 PRINTS Plant lipoxygenase signature 281 302 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 255 273 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 508 527 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 896 910 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 320 336 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 421 442 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 353 372 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 469 485 IPR001246 GO:0016491
Car07g03019 984 PRINTS Plant lipoxygenase signature 575 599 IPR001246 GO:0016491
Car07g03019 984 ProSitePatterns Lipoxygenases iron-binding region signature 2. 665 675 IPR020834 GO:0016702|GO:0046872
Car07g03019 984 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 123 983 - -
Car07g03019 984 MobiDBLite consensus disorder prediction 65 143 - -
Car07g03019 984 PRINTS Lipoxygenase signature 620 637 IPR013819 GO:0016702|GO:0046872
Car07g03019 984 PRINTS Lipoxygenase signature 658 678 IPR013819 GO:0016702|GO:0046872
Car07g03019 984 PRINTS Lipoxygenase signature 638 655 IPR013819 GO:0016702|GO:0046872
Car07g03019 984 Gene3D - 290 392 - -
Car07g03019 984 MobiDBLite consensus disorder prediction 65 141 - -
Car07g03019 984 Pfam PLAT/LH2 domain 199 284 IPR001024 GO:0005515
Car07g03019 984 Gene3D - 393 481 IPR027433 -
Car07g03019 984 PANTHER LIPOXYGENASE 123 983 IPR000907 GO:0016702|GO:0046872
Car07g03019 984 Gene3D - 617 983 - -
Car07g03019 984 Pfam Lipoxygenase 298 967 IPR013819 GO:0016702|GO:0046872
Car07g03019 984 Gene3D - 482 615 - -
Car07g03019 984 SMART LH2_4 147 286 IPR001024 GO:0005515
Car07g03019 984 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 288 984 IPR013819 GO:0016702|GO:0046872
Car07g03019 984 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 147 289 IPR036392 GO:0005515
Car07g03019 984 ProSiteProfiles PLAT domain profile. 163 285 IPR001024 GO:0005515
Car07g03019 984 CDD PLAT_LH2 147 286 IPR042057 -
Car07g03019 984 ProSitePatterns Lipoxygenases iron-binding region signature 1. 638 652 IPR020833 GO:0016702|GO:0046872
Car07g03019 984 Gene3D PLAT/LH2 domain 136 289 - -
Car07g03019 984 SUPERFAMILY Lipoxigenase 290 983 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g03019 Car-Chr7 57000555 57009459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g03019 77 983 Acyl Lipid Metabolism Gene Families AT1G17420 69.824 0.0 1362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g03019 K00454 - gmx:100793614 1506.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03019 07 57000555 57009459 Car07g03019 07 57000555 57009459 ECH