Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02980 ATGGATCTTACAAAGGACTTCTTTTACAGCTACTCATACAACATCATGCTTAGTCTCCAAAAGAATGTATCTAGTCATAATTTTATGGGACAATCACTTTATGAAACACTGTTTGTTTGGAACGAGTTTTTAACTCGTGGAATCAGGAATAATCTTCAGAATACTTCCTGGACTGTCGCCTTAGTCTATGGCTTTTTCAAACAGGTTAAACTTTCTATATCTGGAAGTGAGTTCAACTTGATTATCATTGCTCGTCGCTCAAGGCACTATGCTGGCACAAGATATTTGAAACGAGGAGTGAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAAATAGTCTTTGCAGATGCTAGTGATGGATCGCCGATGCAAATCAGTTCTGTTGTGCAGATCCGGGGTTCAATCCCTCTATTCTGGACTCAAGAAGCCTCTCCGTTGAATATAAAACCTGACATTATATTATCACCGAAGGACTCTACGTTTGAAGCCACAAGACTTCATTTTGAAAATCTTACTAAGAGATATGGAAATCCAATTATCATATTGAACTTGATTAAGACTCGTGAGAAGAAGCCTCGTGAAACTATTCTGCGAAAAGGGTTCTCTGTTGCTGTTAGGTCTATTAATCAAAATTTGAGAGGAGAAAATCGCCTGAGGTTTCTTCATTGGGATCTGAATAAGCACTCAAAATGCAGCAAGGCAACCAATGTGTTGGCACAACTTGGAAAAGTGGCTGCATACGCACTGAAGCTAACTGGCATCTTCTACTGTCCATTGACACCAGATATGAGGCTATTCCAACATTCCTACTCCGAAAATAACGATGTCATTGATCAATCTGTTGTGGAACAAGCTAGCATAAACAAGTATAATGATGATAAGGAAAAAGAAGTCGGCAATGGTTATTGCAGTGATAACGAGAACAAGGATTACTGTGTCAAACCCAAGATGTATCAAGCTGGTGTGTTGAGGACAAATTGCATAGATTGTTTAGACCGCACCAACGTTGCGCAATATGCTTATGGACTAATTGCACTCGGACGTCAGCTACAAGTATTAGGATTTACTGAAACTCCGTATCTTGATCTCGATAACCCTTTGGCAAAGGAATTAATGACAGCTTATGAGTCCATGGGTGACACATTAGCCTTTCAATATGGCGGTTCTGCCGCGCACAACAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAGCACAATCCCAAGAATTAATTCGAACCCTACAGCGTTATTACAACAATACATATTTGGATGTTTATAAACAAAAAACAATTAACATATTCTTGGGGCATTTTCAGCCACAACAGGGAAAACCAGCACTGTGGGAGCTTGATTCAGATCAATATTACACTGTTGGAAAACATGGCCCAGATTTAGCAGATGGAAGTGTTAGGTCAAGTATTAAAAGATCACTATCAGATGGCAACATTCTCGGCGAAACTGACACTACAATCAGGAATTTGCATGCTCCAGATTGTCAGCACTCGTCTGAAAAACCTGATAAGCAAAGTCTTTTGGAGTCTACTTCAGACATATTTACTTGTGGAAGTTCTATTTGTCATTGCAGGAAAATATATGGAGGAATGGACAAGGACCAATATTGTGATAATGATCACATTTGTTATGATGAACATGGAGATGCAGGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCAGACAATATTGTGAATGAACTAGTAACTGAGACATCTGCAAATGAATCTGGACCCTTCCTGAAGGAGAGACAAAGTGAAGAAGAACTCAACAAAGTTGGAAAATATACTAATAGCTTTGAACATTGGGTGACTCATGGTGAGATGCTTTATGTTTGA 1929 0.3945 MDLTKDFFYSYSYNIMLSLQKNVSSHNFMGQSLYETLFVWNEFLTRGIRNNLQNTSWTVALVYGFFKQVKLSISGSEFNLIIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFADASDGSPMQISSVVQIRGSIPLFWTQEASPLNIKPDIILSPKDSTFEATRLHFENLTKRYGNPIIILNLIKTREKKPRETILRKGFSVAVRSINQNLRGENRLRFLHWDLNKHSKCSKATNVLAQLGKVAAYALKLTGIFYCPLTPDMRLFQHSYSENNDVIDQSVVEQASINKYNDDKEKEVGNGYCSDNENKDYCVKPKMYQAGVLRTNCIDCLDRTNVAQYAYGLIALGRQLQVLGFTETPYLDLDNPLAKELMTAYESMGDTLAFQYGGSAAHNKIFSERRGQWKAAAQSQELIRTLQRYYNNTYLDVYKQKTINIFLGHFQPQQGKPALWELDSDQYYTVGKHGPDLADGSVRSSIKRSLSDGNILGETDTTIRNLHAPDCQHSSEKPDKQSLLESTSDIFTCGSSICHCRKIYGGMDKDQYCDNDHICYDEHGDAGDCSNFLDVDWLSSSGNSCEEELLERSTSISSDNIVNELVTETSANESGPFLKERQSEEELNKVGKYTNSFEHWVTHGEMLYV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02980 642 Pfam SacI homology domain 4 233 IPR002013 GO:0016791
Car07g02980 642 ProSiteProfiles Sac phosphatase domain profile. 1 391 IPR002013 GO:0016791
Car07g02980 642 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 1 642 - -
Car07g02980 642 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 642 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02980 Car-Chr7 56446087 56457803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02980 16 634 Acyl Lipid Metabolism Gene Families AT3G14205 54.432 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02980 K22913 - gmx:100796788 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02980 07 56446087 56457803 Car07g02980 07 56446087 56457803 ECH