Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02978 atgaagttgaTTGTAGGATGTATTTTCTTCCATGTTTTCCTTATTATAGCACTATTAGTATCTCATCAAATCAATGGAAGAAATACAAATTATGTAACCAACAATTACACTTCCTTGTTCATTTTTGGTGATTCTTTCTTAGATGCTGGCAATAACAATTACATAAACACTACAAGCTTTGACCAAGCAAATTTCTTGCCTTATGGTGAAACCTACTTCAAGTTCCCAACGGGTAGATTCTCTGATGGCCGTTTGGTTTCTGATTTCATTGCTGAATACGCAAATATGCCATTGGTACCACCATTTCTACAACCTGGCTACAACCAATACTACAAAGGAGTTAATTTTGCTTCTGGGGGTGCAGGTGCACTTGTTGAAACTTTCCAAGGGTCGGTAATACCTTTCAAAACACAAGCAAGAAACTTCAAGAAAGTAACAGTTTGGTTGAGGCACAAGTTAGGCAGCTCCAATTCACAAAAATTGTTATCAAATGCTGTCTACATGTTTAGCATCGGATCTAATGATTATCTTAGTCCATTCTTGACAAATTCTGATGTTCTAAACTCTTATTCTCATTCTCAATATGTTGCCATGGTTGTTGGTAACTTTACTTCCATTATTAAGGAAATACATAAGAGAGGGGCTAGAAAATTTGCATTCTTGAACTTACCACCCTTAGGATGTCTTCCAGGAACCAGAATAATTCAATCACAAGGGAAAGGTAGGTGCTTAGAGGATCTTTCATCACTAGCAAGTTTGCATAATCAAGCTCTCTATGAGGTTCTCATTCAATTGGAAAAGCAATTAAGGGGCTTTAATTTTTCTCTTTATGATTTCAACTCTGATCTCACTCAAATGATCAACCATCCCCTAAAATATGGATTGAAGAAAGGAAAATCAGCATGTTGTGGAAGTGGACCATTTAGAGGAAAATATAGCTGTGGTGGAAAAAGAGGAGAGAAATACTTTGAATTATGTGACAAACCCAATCAATATTTGTTTTGGGATTCTTACCATCTTACAGAAAGTGCTTACAAACAATTGGCAACTCGAATGTGGAGTTATACCAAAAACTCTCATACTATTGGGCCTTACACTATTCGTGATTTCTTCTAA 1116 0.3584 MKLIVGCIFFHVFLIIALLVSHQINGRNTNYVTNNYTSLFIFGDSFLDAGNNNYINTTSFDQANFLPYGETYFKFPTGRFSDGRLVSDFIAEYANMPLVPPFLQPGYNQYYKGVNFASGGAGALVETFQGSVIPFKTQARNFKKVTVWLRHKLGSSNSQKLLSNAVYMFSIGSNDYLSPFLTNSDVLNSYSHSQYVAMVVGNFTSIIKEIHKRGARKFAFLNLPPLGCLPGTRIIQSQGKGRCLEDLSSLASLHNQALYEVLIQLEKQLRGFNFSLYDFNSDLTQMINHPLKYGLKKGKSACCGSGPFRGKYSCGGKRGEKYFELCDKPNQYLFWDSYHLTESAYKQLATRMWSYTKNSHTIGPYTIRDFF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02978 371 CDD SGNH_plant_lipase_like 37 354 IPR035669 -
Car07g02978 371 PANTHER GDSL ESTERASE/LIPASE 5 8 371 - -
Car07g02978 371 Pfam GDSL-like Lipase/Acylhydrolase 39 350 IPR001087 GO:0016788
Car07g02978 371 Gene3D SGNH hydrolase 27 362 IPR036514 -
Car07g02978 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 371 IPR044552 -
Car07g02978 371 SUPERFAMILY SGNH hydrolase 38 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02978 Car-Chr7 56399214 56410719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02978 38 354 Acyl Lipid Metabolism Gene Families AT4G10950 30.864 1.52e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02978 - - gmx:100819379 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02978 07 56399214 56410719 Car07g02978 07 56399214 56410719 ECH