Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02968 ATGCAGAAGCTAGGTTGTTTGTCAATGGATGCAATAGACAAGACCTTTTCTGAACTTGTCAGTATCATTAAATCATGGATTCCCTGGCAATCTGAGCCAGCAAACGTGTCTAGGGATTTTTGGATGCCGGATCACAGTTGTAGAGTATGCTACGAGTGTGATTCCCAGTTTACTATCTTTAATCGCAGACACCATTGTCGTCTTTGTGGACGAATTTTCTGTTCCAAGTGTACAACAAACTCGGTTCCTGCCCCATTTAGCAGCCAAAGGAATTCTTGGGATGAGTCGGAAAAGATTCGTGTGTGCAATTACTGTTACAAGCAATGGGAGCAGGGTATAGTTACTTTTGATAACGGTGGTCAGGTTTCCAATCTCGAACGAACAATGTCAACGTCGAGCGTGGCTAGCAGTAAAACCAGTGCCACCGCTAACAGTAGTAACATTACTATTTGCTCCATGCCTTATTCAGTTGGATCTTATCAACAAATCCAACAGGGTTCATGTGTGAACCTACATCAATCACCTATGAGGGGAAAAGATACTGATAGGGAAGGTTTATCATCAGCCTTAGGAGGGAGGAATATTGATCTTGTAGCAGACCTAGGGGACCCTTTACCAAAGCAATATGGCTTCTCATCGAACAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCGGTCAGATTCTGATATGAGGCAATATCCTCAAGTGAGTAGCTACTATGGACAAGCTGTGCTTGACGGGATAAGCAACATTGATGGCTCACCGAAAGTGCATCCCGACGGAGAAAACATTGATGCAAAACTTTCAAACTACAATTTTGATGCACAGAGTTTGGAGGGAACACCAGTTATTTCAAAGAATGAAGATGAACCAGATATCTGTGATGAAAATGAAGCACCTTCCTCGTTATATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTGTGGCTCCCTCCGGAACCAGAAGACGAAGAAGATGATCGGGAAGCGATTCTTTTTGACGACGACGATGATAATGAGGGGAACAGCACCGGAGAGTGGGGTTATCTGCGCAATTCAAGCAGTTTTGGAAGTGGGGAGTCTCGACACAGAGATAGGTCAAATGAGGAGCACAAGATGGTAATGAAGAATGTAGTTGATGGGCACTTTAGGGCATTGGTATCTCAGCTGTTACAGGTAGAGAACCTACCGGTTGAAGACAATGACAAAAACAGTTGGTTGGAAATAATCATATCTTTGTCATGGGAAGCTGCTAATTTACTGAAACCAGATATGAGCAAAGGTGGAGGGATGGACCCGGCTGGTTATGCTAAAGTCAAATGCATAGCATGTGGGCACCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTTGCTCATCGGAGAATGAGGTCAAAAGTGGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTTGAATATCAGCGTGTAACCAATCTCTTGTCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCACACCAGCCAAATATCCTTCTGGTAGAGAAATCGGTTTCTCGATATGCACAGGAATATCTTCTTGCCAAAGACATAACTCTGGTTCTCAATGTAAAGAGACCGCTTTTGGAGCGCATAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTTTCGTCACAAAAGTTGGGTTTCTGTGAAACATTGCGTGTTGAAAAGTTTCTTGAAGACCTAACTGGTGCTGGTCAGGGTGCGAAAAAAACAGTGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTAGGTTGCACAATTTTACTTAGAGGAGCTGACATGGATGAACTGAAAAAGGTAAAGCATGTGGTTCAGTATGCAGTTTTTGCTGCATACCATTTGGCTATGGAAACATCTTTTCTTGCTGATGAAGGAGTCTCCTTGCCGGAACTTCCATTAAACAGTCTGGCCCTTCCAAATAAAGCATCATCCATTCAAAGGTCCATCTCAACGGTTCCTGGTTTTAGTGTTCCCGGCAATGAAAAGTCTCAGGGCCAAGAACCCAACACTGAACCACGGAGAACCAAAAGTGTCACAATGGCTGAACTATCCTTATCTATTGGTTCTTCTCAATCTACGCCACCTGGATCAGATCTTAACCATTCAACTGCCTTGTACTCCACCATTGTTGCTTCAGGAGATGAAATTCCCGATCCATACCGCACGAAGCTTCTTTTGTGCACGAATAAAGAGAGAAATGATACGGACTCTAATCAACCTTCGGTGAAAGGAACTTCTATGGTGGATAACACTCCGGTAGTCATGGATGATCCCTTTGCAAATGATTCTGAAAGTGCAGAGAAAATATATCAAGGCATTTTAGCTTCAAATACTCGAAATGGTCATAGCCAAATCTATGCAAATCAATTAAGTGCTTCAGAGTCGTTATCTCCAAATTATGCTCAAAACCATACTGTAATCACATATGAAGAACCAGTTCCTCAAAAAGAAGAGTTTCCTCCATCTCCCTCTGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGCGTATGGAAAGGAACTGTGTGTGAGAGGTCGCATCTATTTCGAATTAAATACTATGGAAGCTTTGACAAACCATTGGGTCGGTTTCTGCGGGACCATTTATTTGATCAGGGTTATCGATGTCATTCTTGTGATATGCCATCGGAAGCACATGTGCATTGTTATACTCATCGACAGGGAACGCTTACCATATCAGTCAAGAAACTACCAGAAATTATCCTTCCTGGTGAAAGGGAGGGAAAGATTTGGATGTGGCATAGGTGCTTGCGGTGTCCAAGAATCAACGGCTTTCCTCCTGCCACACAGAGAATAGTAATGTCTGATGCTGCTTGGGGTTTATCGTTTGGAAAATTTTTAGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCTCTTCACAGAGATTGTCTTCGTTTTTATGGATTTGGGAAAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCACCACACAAACTGAATTTTGATTATGGGAATCAGGATTGGATACAGAAAGAATCCAATGAGGTGGTCAACCGAGCAGAGCTTTTATTCTCTGAAATACTCAATGGTCTTAGTCAAATTGGAGAGAAAAGATCTAGCGCAGCCCAAACCAGTAGCGGCCAGAAAACACCTGAATTAAGACGCCAAGTTGCTGAACTGGAGGGGATGTTGCAAAAGGAGAAACTGGAATTTGAGGAAACTCTTGAAAAGATTATGAACCAAGAAAAGAGAAATGGGCAACCTGGGATCGACATTCTGGAAATTAATCGATTGTGGAGGCAGTTGCTTTTCCAATCATATATGTGGGATAACCGCCTTATTTATGCAGCCAGCTTATCTAATTCCAACAGTGAAACTTGTTCAATTTCAGAGGATAAGGAAATACCTCCTATAGATGAAAGTTTGACGACTGCGGTCTCCTTGGCAGGAAGGGGATTCAGTAGTGTTGACTCCATTCACAGCGATCCAACGCAGTCAGATGCATTTCATCAAGAAATCGACATGGCCAAAAATAAGCAAAACGAGAAAGAAGAACAACCTAATCTTTCGAGCAGCAAAAGCATAAATGATCAATCTGACCTTTTAGAACTTGAATGGGGTGTTCGCAGAGCTCTCTCTGAAGGGCCATTTCCTGTCGTACCTAGTTTGTCTGATACACTTGATGCAAAATGGACAGGTGAAAACCACTCAGGAATTGGAACTCAAAAGGAAAGCACTTCCGTAATTAACCTTGATATATCTATGGCAGATGCTTTGACGACCACTACACAAAGAGAAACATACTATCTCGGAGATCGCATGGAAGACCAGAATGGCTCCAAGAGTATCTATTCTGCTTCTAAAGGTCATGATAGTATGGAAGACTCTTTAAGTTGGTTAGGAATGCCATTTGTAAACTTCTATCGCCAATTTAACAAGAATTTGTTTGCTAGTAGCCAGAAGTTTGAAACACTGGTCGACTATAATCCTGTTTTTGTATCATCTTTCGGGAAGCTGGAACTCCAAGGTGGGGCAAGGATGCTTCTTCCGATTGGTGTTAATGATACTGTAATTCCAATATATGATGATGAACCCTCGAGTATTATAGCATATGCCTTGATGTCACCAGAATATCATTCCCAATTATTGGATGAAGGAGACAGACCAAAAGAAGGTTCTGAGTTGGCCTCATCATATTTTTCTGAGTCTGGTGCTTTCCAGTCGTTTTCATCTGCTGACGACAATGCTTTTGATTCTCAGAAAAGTTTTGGGTCGATAGAGGATATGATATTGTCCATATCTGGTTCTCGTAACTCGTCTATATTGGACCCGGTGTTGTATACAAAAGCTATGCATGCAAGAGTTTCCTTTGGAGAAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTGGTTACTATGCGAAGCGATTTGAAGCCTTAAGAAGAGTCTGTTGTCCTTCAGAGCTCGACTATATAAGGTCTCTGAGTCGATGTAAGAAATGGAGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACCTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACCGAGCTCGAATCATTCATAAAATTTGGTCCCGAATACTTCAAGTACCTTTCTGAATCCATAGGAACTGGAAGTCCAACATGCCTGGCCAAGATTCTTGGCATATACCAGGTTACGTCGAAGCATCTTAAAGGAGGTAAAGAGTCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTATTTAGGAGGACTGTGACACGACTTTATGATCTCAAAGGATCTTCCAGGTCTCGGTATAATCCAGATAGTACAGGGAAAAACAAAGTTCTTCTGGACCAGAACTTGATTGAAGCAATGCCAACTTCTCCTATTTTTGTCGGAAACAAGGCCAAAAGATTGTTAGAAAGAGCTGTCTGGAATGATACTGGTTTTCTTGCATCAGTTGATGTAATGGACTATTCATTACTTGTTGGTGTGGATGAAGAGAAACATGAGTTAGTTCTTGGAATAATTGATTTCATGAGGCAATATACATGGGACAAACATCTTGAAACATGGGTGAAAGCTTCAGGAATCCTTGGAGGACCAAAGAACACATCACCAACAGTTATATCACCAAAACAATACAAGAAAAGGTTCAGAAAAGCAATGACCACTTACTTTCTCATGCTTCCAGATCAGTGGTCTCCTCCATCTCTTATTCCTAGTCTTTCTCAAAGTGATTTATGTGAAGAAAACAATACAACACAACAGTCTAGGACTTTAGCTGAATGA 5445 0.4184 MQKLGCLSMDAIDKTFSELVSIIKSWIPWQSEPANVSRDFWMPDHSCRVCYECDSQFTIFNRRHHCRLCGRIFCSKCTTNSVPAPFSSQRNSWDESEKIRVCNYCYKQWEQGIVTFDNGGQVSNLERTMSTSSVASSKTSATANSSNITICSMPYSVGSYQQIQQGSCVNLHQSPMRGKDTDREGLSSALGGRNIDLVADLGDPLPKQYGFSSNRSDDDEDEYGVYRSDSDMRQYPQVSSYYGQAVLDGISNIDGSPKVHPDGENIDAKLSNYNFDAQSLEGTPVISKNEDEPDICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDDREAILFDDDDDNEGNSTGEWGYLRNSSSFGSGESRHRDRSNEEHKMVMKNVVDGHFRALVSQLLQVENLPVEDNDKNSWLEIIISLSWEAANLLKPDMSKGGGMDPAGYAKVKCIACGHRIESVVVKGVVCKKNVAHRRMRSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDITLVLNVKRPLLERIARCTGTQIVPSIDHLSSQKLGFCETLRVEKFLEDLTGAGQGAKKTVKTLMFFEGCPKPLGCTILLRGADMDELKKVKHVVQYAVFAAYHLAMETSFLADEGVSLPELPLNSLALPNKASSIQRSISTVPGFSVPGNEKSQGQEPNTEPRRTKSVTMAELSLSIGSSQSTPPGSDLNHSTALYSTIVASGDEIPDPYRTKLLLCTNKERNDTDSNQPSVKGTSMVDNTPVVMDDPFANDSESAEKIYQGILASNTRNGHSQIYANQLSASESLSPNYAQNHTVITYEEPVPQKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQGYRCHSCDMPSEAHVHCYTHRQGTLTISVKKLPEIILPGEREGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHKLNFDYGNQDWIQKESNEVVNRAELLFSEILNGLSQIGEKRSSAAQTSSGQKTPELRRQVAELEGMLQKEKLEFEETLEKIMNQEKRNGQPGIDILEINRLWRQLLFQSYMWDNRLIYAASLSNSNSETCSISEDKEIPPIDESLTTAVSLAGRGFSSVDSIHSDPTQSDAFHQEIDMAKNKQNEKEEQPNLSSSKSINDQSDLLELEWGVRRALSEGPFPVVPSLSDTLDAKWTGENHSGIGTQKESTSVINLDISMADALTTTTQRETYYLGDRMEDQNGSKSIYSASKGHDSMEDSLSWLGMPFVNFYRQFNKNLFASSQKFETLVDYNPVFVSSFGKLELQGGARMLLPIGVNDTVIPIYDDEPSSIIAYALMSPEYHSQLLDEGDRPKEGSELASSYFSESGAFQSFSSADDNAFDSQKSFGSIEDMILSISGSRNSSILDPVLYTKAMHARVSFGEDGPLGKVKYSVTGYYAKRFEALRRVCCPSELDYIRSLSRCKKWRAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNPDSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSLIPSLSQSDLCEENNTTQQSRTLAE 1814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02968 1814 Coils Coil 1106 1133 - -
Car07g02968 1814 MobiDBLite consensus disorder prediction 342 378 - -
Car07g02968 1814 SMART PIPK_2 1488 1779 IPR002498 GO:0016307|GO:0046488
Car07g02968 1814 SUPERFAMILY SAICAR synthase-like 1511 1778 - -
Car07g02968 1814 MobiDBLite consensus disorder prediction 770 787 - -
Car07g02968 1814 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 115 IPR013083 -
Car07g02968 1814 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 9 1801 - -
Car07g02968 1814 MobiDBLite consensus disorder prediction 213 228 - -
Car07g02968 1814 Pfam TCP-1/cpn60 chaperonin family 412 657 IPR002423 GO:0005524
Car07g02968 1814 CDD PIPKc_PIKfyve 1515 1778 IPR044769 GO:0000285
Car07g02968 1814 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1485 1635 IPR027484 -
Car07g02968 1814 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 9 1801 - -
Car07g02968 1814 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 44 110 IPR017455 -
Car07g02968 1814 SUPERFAMILY FYVE/PHD zinc finger 39 110 IPR011011 -
Car07g02968 1814 CDD FYVE_PIKfyve_Fab1 40 107 - -
Car07g02968 1814 Gene3D GroEL 458 630 IPR027409 -
Car07g02968 1814 SMART fyve_4 36 111 IPR000306 GO:0046872
Car07g02968 1814 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1553 1720 IPR002498 GO:0016307|GO:0046488
Car07g02968 1814 Gene3D - 1637 1779 - -
Car07g02968 1814 SUPERFAMILY GroEL apical domain-like 458 630 IPR027409 -
Car07g02968 1814 CDD Fab1_TCP 393 664 - -
Car07g02968 1814 MobiDBLite consensus disorder prediction 690 718 - -
Car07g02968 1814 MobiDBLite consensus disorder prediction 770 799 - -
Car07g02968 1814 MobiDBLite consensus disorder prediction 208 229 - -
Car07g02968 1814 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1454 1778 IPR002498 GO:0016307|GO:0046488
Car07g02968 1814 Pfam FYVE zinc finger 41 109 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02968 Car-Chr7 56240439 56251245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02968 10 1814 EF-hand Containing Proteins AT3G14270 59.989 0.0 2073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02968 K00921 - gmx:100819364 2965.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02968 07 56240439 56251245 Car07g02968 07 56240439 56251245 ECH