Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02961 ATGAGAGAGCCAAGAGATGCAATCAAAACCGATCTCAAAACCACCAAATCCGCATCTTCACCTGCTTCTTTCCCTCTCATTCTCGACGTCGATGACTTCAAGGGAGATTTCTCGTTCGATGCGCTGTTCGGGAATCTGGTGAATGAGCTTCTTCCGTCTTTCAAATTAGAGGAACTTGAATCGGACGGTGGTGATTCTCTGCCGAACGGTCATCTACGGTCTGATGCGAATAAATACTCGCAAGGCGTTTCGAGTCCCTTGTTTCCTGATGTTGAGAAACTCTTGTCTTTGTTCAAGGATTCTTGTAAGGAATTGCTTGAGCTACGTAAACAGATTGATGGGAGACTGTACAATCTTAAGAAAGATGTTACTGTTCAAGACTCTAAGCATCGGAAGACACTAGCTGAGCTGGAGAAAGGTGTAGATGGGTTGTTTGAAAGCTTTGCGAGGTTGGATTCACGTATTTCAAGTGTTGGTCAGACAGCTGCAAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACTATTGAGCTGATAAAATACTTAATGGAGTTCAATAGCAGCCCTGGCGATCTGATGGAGCTTTCCCCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATTGCACAAAAATTGCGGTCATTTGCTGAAGAAGATATAGGAAGACATGGTATAACTGCCCCATCAGCAATGGGAAATGCAACGGCTAGCAGGGGATTAGAAGTTGCAGTTGCTAATTTACAGGAATACTGTAATGAATTGGAGAATAGACTGCTTTCTCGGTTCGATGCAGCATCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGGACAAGTGCCATGCAACATTATGTAGCAACACGTCCAATGTTTATTGATGTGGAAGTAATGAATGCAGACACTAGGTTGGTTCTTGGTGACCAAGCTGCACAAACTAGTCCTACTAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGACACTGTCCGTAAAGAGGCTGCAACAATCACTGCTGTATTCCCTTCACCCAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAGTTACTGCCCTTCTGGACAAACTATTAGTTAAACCTTCTCTTGTGAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTCTATCTTCGAATGCTGGCAGTGGCGTATGAAAAGACCCAAGAAGTTGCTAGAGATCTCCGAGTTGTAGGATGCGGTGACTTGGATGTTGAGGGCCTGACAGAGTCCTTGTTTTCGAATAACAAGGATGAATATCCTGAATATGAGCAGGCATCTCTCAGACAGTTATATAAAGTGAAGATGGAAGAATTGCGAGCTGAAAGCCAGATTTCTGATTCATCTGGAACAATTGGACGCTCAAAGGGAGCTACGGTAGCTTCTTCTCAGCAGCAAATATCCGTCACTGTTGTAACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCAAGATGCAATCTCTTTTCTTCCCAGCCTGCTACACTGGCAACCCATGTAAAAGCAGTGTTTACTTGCCTGCTTGACCAAGTTAGTCAATATATAGCAGAAGGTCTTGAACGCGCTAGAGACGGTCTGACTGAAGCAGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTAGCCGTAGGGTTGCTGCTGCGGCCGCATCTGCTGCGGAGGCCGCGGCTGCTGCTGGTGAAAGCAGTTTTAGATCTTTCATGGTTGCTGTACAACGTTCGGGAAGTAGTGTAGCTATTATTCAACAATACTTTGCAAATTCTATATCTAGGCTTTTGCTTCCTGTGGATGGTGCACATGCTGCTGCTTGTGAAGAAATGGCTACAGCAATGTCAAGTGCAGAGGCTGCTGCTTACAAAGGATTACAACAGTGTATTGAAACTGTCATGGCTGAGGTAGAGCGATTGCTTTCAGCTGAGCAAAAGGCTACGGATTATAAATCACCTGAGGATGGAATGGCCCCTGACCACCGGCCAACTACTGCCTGCACAAGGGTTGTGGCTTATCTTTCTCGGGTGCTGGAGTCTGCATTTACTGCTTTAGAAGGTCTTAATAAACAAGCATTTTTGTCTGAACTGGGAAATCGCTTGCACAAGGTTCTGCTAAACCATTGGCAGAAATATACTTTCAATCCAAGTGGGGGATTGCGTCTGAAGCGTGACATTACCGAGTATGGAGAATTTGTGCGTAGTTTCAATGCTCCTTCTGTCGATGAGAAATTTGAATTGTTGGGCATAATGGCCAATGTCTTCATTGTTGCCCCTGAGAGCCTTTCAACTTTGTTTGAGGGTACACCCAGCATCCGGAAAGATGCGCAAAGATTTATTCAACTTCGGGATGACTACAAGAGTGCCAAGCTTGCATCCAAATTGAGTTCCTTGTGGTCTTAA 2490 0.447 MREPRDAIKTDLKTTKSASSPASFPLILDVDDFKGDFSFDALFGNLVNELLPSFKLEELESDGGDSLPNGHLRSDANKYSQGVSSPLFPDVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVTVQDSKHRKTLAELEKGVDGLFESFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGITAPSAMGNATASRGLEVAVANLQEYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGDQAAQTSPTNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRVTALLDKLLVKPSLVNLPSMEEGGLLFYLRMLAVAYEKTQEVARDLRVVGCGDLDVEGLTESLFSNNKDEYPEYEQASLRQLYKVKMEELRAESQISDSSGTIGRSKGATVASSQQQISVTVVTEFVRWNEEAISRCNLFSSQPATLATHVKAVFTCLLDQVSQYIAEGLERARDGLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAAACEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYKSPEDGMAPDHRPTTACTRVVAYLSRVLESAFTALEGLNKQAFLSELGNRLHKVLLNHWQKYTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLRDDYKSAKLASKLSSLWS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02961 829 Coils Coil 247 267 - -
Car07g02961 829 Gene3D - 662 823 - -
Car07g02961 829 Pfam Exocyst complex component Sec10 492 823 IPR009976 GO:0005737|GO:0006887
Car07g02961 829 Pfam Exocyst complex component Sec10 142 476 IPR009976 GO:0005737|GO:0006887
Car07g02961 829 PANTHER EXOCYST COMPLEX COMPONENT SEC10-LIKE PROTEIN-RELATED 18 828 - -
Car07g02961 829 PANTHER SEC10 18 828 IPR009976 GO:0005737|GO:0006887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02961 K19984 - gmx:100820430 1429.08