Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02960 ATGGCGGAGAAAGCATGCATCAAGCGCCTTCAGAAGGAGTATAGAGCCCTTTGTAAAGAGCCAGTTTCCCATATTGTGGCTCGTCCTTCACCAAGTGATATTCTTGAGTGGCATTACGTTTTGGAAGGAAGCGAGGGAACACCTTTTTCAGGTGGATATTACTATGGAAAAATCAAGTTTCCTCCAGAATATCCATATAAACCTCCAGGAATCAGCATGACAACACCTAATGGGCGGTTCATGACACAGAAAAAGATCTGTTTATCTATGAGTGATTTTCATCCTGAAAGTTGGAATCCAATGTGGTCTGTATCAAGCATACTTACTGGGCTTCTTTCATTCATGATGGACACTAGTCCAACCACAGGAAGTGTAAACACCACTACTGTTGAGAAGCAGCGTCTAGCAAAATCTTCCCTTGCTTTCAATTGTAAGAATGCAACATTCAGGAAAATGTTCCCCGAGTATGTGGAGAAATACAACCAGCAACAGCTTTCTGAGCAAGTTGCTACTGAGCAGCGAGAGACTCGCCATGATAAAAGTTCAAGGTCTGTTTCTGAAAAGAATTCAGACTCCACAGGAGAAGACATGAAAAAGGTAGAAGGATTGAAGGATGTGAGGAGAAACAAAAAACAACCTTTTCCTACATGGGTGATGCTATTACTCTTCTCCATTTTTGGGGTTGTTATGGCATTACCTCTACTCCAGCTGTGA 714 0.4216 MAEKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTVEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRNKKQPFPTWVMLLLFSIFGVVMALPLLQL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02960 237 CDD UBCc 7 157 IPR000608 -
Car07g02960 237 Pfam Ubiquitin-conjugating enzyme 9 123 IPR000608 -
Car07g02960 237 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Car07g02960 237 Gene3D Ubiquitin Conjugating Enzyme 1 180 IPR016135 -
Car07g02960 237 PANTHER BNAA06G11590D PROTEIN 3 237 - -
Car07g02960 237 MobiDBLite consensus disorder prediction 171 204 - -
Car07g02960 237 SUPERFAMILY UBC-like 6 158 IPR016135 -
Car07g02960 237 MobiDBLite consensus disorder prediction 167 204 - -
Car07g02960 237 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 237 - -
Car07g02960 237 SMART ubc_7 8 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02960 Car-Chr7 56153366 56159015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02960 1 237 Miscellaneous Gene Families AT1G17280 78.661 1.27e-141 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02960 K04554 - gmx:100778181 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02960 07 56153366 56159015 Car07g02960 07 56153366 56159015 ECH