Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02940 ATGGTGGTAGCTGCAGGTTCTAAGTTCAATTTGAGAAGAGGGAACACTGATTCTTCTCATAATAATGTTGTTATCAATAACTGTGATGGAGGAGAGCTTTCTAGAATTAATAAAAGTGTTTGTTTTTCATCAATTGTAGAAGTTGATAAAGACCCTTCTTGTGTTTCATTCACTACTTTCAATATCCTTGCTCCTATTTACAAAAGGATTGATCCACAGAACCAAGGGCTTAGAGAAAGTGACTTCAGATCATTTTGGTTCGCTAGGAATGAAAGGATTCTTGATTCATTGCTTTCTGAATCATCTTCTATTATGTGTTTACAGGAGTTTTGGGTTGGAAATGAAGAACTTGTTCACATGTATGAGGAGAGACTTGGGGATGCTGGCTATCATCTCTTCAAGCTTGCTCGAACTAACAATCGTGGAGATGGCCTCCTTACTGCTATACATAAAGAATATCTAAGTATTGTAAATTATCGAGAGTTGCTTTTCAACGATTGTGGTGACCGTGTTGCTCAGTTGTTACATGTTCAATCAGTTAATCCCATTTCACATGACCAAAAAGGAAATTTTCACCAAGAGTTTCTGATAGTGAATACTCACTTGCTATTTCCTCATGATTCAAGTCTGTCTATAGTGAGATTGGATCAGGTTTATCAAATATTACAATATGTGGAATTGTATCAGAGAGAAAACAGGCTCAAACCAATGCCTATTATACTTTGTGGTGACTGGAATGGAAGCAAGCGTGGACATGTTTACAAGTTCCTTAGGTCACAGGGATTTGTATCATCGTATGATATTGCAAATCATTATACTGATAGTTATGCTGATGCACACAAGTGGGTTAGTCACAGAAATCATAGAGGAAATATATGTGGTGTTGACTTCATTTGGCTTTGCAATCCTAACCAAGCGCGTAAACCGTTGAAAACAAGTTGGGCCGAAGCTGTATTTAGTATACTAAAGTTTCAGCTACGAAAGGCGTCATTGTCCGAAGATGATGCCTTTACATTTTTGAAGGGTGACAATTGTGCTGGTTCTGTAACATATTTTAGTTTTTCTGAAGCACTTCGTCAGTTAAAGTTAATTGGTGTGCCTTATGGACTATGCTTCCAACAGTTGCAAGATCTATGGAATCAAGCTGATGTAGCTGGAAATGGTGTAATCGATTTAGAAGAATTCAAGGTATATATTTATCATGTCTTAACTTGTGTATGA 1221 0.3702 MVVAAGSKFNLRRGNTDSSHNNVVINNCDGGELSRINKSVCFSSIVEVDKDPSCVSFTTFNILAPIYKRIDPQNQGLRESDFRSFWFARNERILDSLLSESSSIMCLQEFWVGNEELVHMYEERLGDAGYHLFKLARTNNRGDGLLTAIHKEYLSIVNYRELLFNDCGDRVAQLLHVQSVNPISHDQKGNFHQEFLIVNTHLLFPHDSSLSIVRLDQVYQILQYVELYQRENRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANHYTDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKFQLRKASLSEDDAFTFLKGDNCAGSVTYFSFSEALRQLKLIGVPYGLCFQQLQDLWNQADVAGNGVIDLEEFKVYIYHVLTCV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02940 406 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 5 399 - -
Car07g02940 406 SUPERFAMILY EF-hand 337 401 IPR011992 -
Car07g02940 406 Pfam Endonuclease/Exonuclease/phosphatase family 86 280 IPR005135 GO:0003824
Car07g02940 406 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Car07g02940 406 SUPERFAMILY DNase I-like 49 276 IPR036691 -
Car07g02940 406 Gene3D Endonuclease/exonuclease/phosphatase 38 332 IPR036691 -
Car07g02940 406 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 5 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02940 Car-Chr7 55941107 55944890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02940 31 364 EF-hand Containing Proteins AT5G54130 68.263 4.52e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02940 - - gmx:100777138 688.723