Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02927 ATGACAAACCTCTCACTTTCTCTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTCGTAAGCTTCTTCGTTTCAATGCTCTCAATAAGCCTTTTCTTCATCGCCGTCCATCAGCAGCAGCATCAGCACCTGTTGCTCTTGAACAAACCTCCAATTTGCTTATTACTAAAGAGGAAGGGTTAGTGCTTTACGAAGACATGGTATTAGGGAGGTCCTTTGAAGACAAGTGTGCTGAGATGTATTATAGAGGAAAAATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAAGCTGTTTCAACTGGATTCATCAAGCATTTGAGGAAAGAAGATTGTATAGTGAGCACATACAGAGACCATGTTCATGCATTGAGTAAAGGAGTCCCTTCTCGAGCTGTGATGAGCGAACTCTTTGGAAAGGCGACAGGATGCTGCCGAGGTCAAGGTGGTTCGATGCATATGTTCTCAAAAGAACACAACGTGCTTGGTGGTTTTGCATTCATCGGTGAAGGAATTCCAGTGGCAACTGGTGCCGCGTTTTCCATGAAGTACAAAAGAGAGGTGTTGAATCAGGCGGATTCCGATAACGTGACGTTGGCGTTTTTCGGAGACGGAACTTGTAATAATGGTCAGTTCTTTGAGTGCTTGAACATGGCAGCTTTGTGGAAATTGCCAATTGTGTTTGTGGTGGAAAATAATTTGTGGGCGATTGGGATGTCGCATATCAGGGCAACTTCAGATCCTCAGATATGGAAAAAGGGACCGGCATTTGGAATGCCAGGGGTTCATGTTGATGGGATGGATGTTTTGAAGGTCAGAGAGGTGGCAAAGGAGGCAATCGACAGGGCGAGAAGAGGAGAGGGACCAACTTTGGTGGAATGTGAGACTTACAGATTTAGAGGACATTCGTTGGCCGATCCTGATGAGCTTCGTAACCCCGCTGAGAAAGAACACTATGCTACTAGGGACCCCATCACTGCATTGAAGAAATACCTTTTTGAGAACAAATTAGCCACCGATCAAGAACTGAAGACAATAGACAAGAAAATCGACGAGATCCTTGAGGAAGCCGTTGAATTTGCCGATAACAGTCCTCCACCGCCACGCAGCCAGCTTCTAGAGAATGTGTTTGCTGATCCAAAAGGTTTTGGAATCGGACCAGATGGAAGGTATAGATGTGAGGATCCGAAGTTTACTGAAGGAACTGCTCATGTCTAA 1230 0.4382 MTNLSLSLPXXXXXXXXXXXXXTRKLLRFNALNKPFLHRRPSAAASAPVALEQTSNLLITKEEGLVLYEDMVLGRSFEDKCAEMYYRGKMFGFVHLYNGQEAVSTGFIKHLRKEDCIVSTYRDHVHALSKGVPSRAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSMKYKREVLNQADSDNVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHIRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIDRARRGEGPTLVECETYRFRGHSLADPDELRNPAEKEHYATRDPITALKKYLFENKLATDQELKTIDKKIDEILEEAVEFADNSPPPPRSQLLENVFADPKGFGIGPDGRYRCEDPKFTEGTAHV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02927 409 CDD TPP_E1_PDC_ADC_BCADC 67 365 - -
Car07g02927 409 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 54 409 - -
Car07g02927 409 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 54 409 - -
Car07g02927 409 Pfam Dehydrogenase E1 component 70 371 IPR001017 GO:0016624
Car07g02927 409 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 62 382 IPR017597 GO:0004739|GO:0006086|GO:0043231
Car07g02927 409 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 58 384 IPR029061 -
Car07g02927 409 Gene3D - 37 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02927 Car-Chr7 55685191 55688694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02927 26 409 Acyl Lipid Metabolism Gene Families AT1G01090 82.171 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02927 K00161 - gmx:100811207 709.909