Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02926 ATGGAGCTCGACCTCCGCTCTTTCCTTCCCGACGACGCCGACACCGAACTCCATAACACTCCTCACCGAACTGTCGACGAAATTCTCAACGACTGCGACAcatcctcttcttcatctacaccttctcccccttcttctccttctcatcaCAATAATAATAATAATACCAAACCCACTCACTTTCCTCAACCCGTACCCGTTTCCCTTTCTCGGATCAAACCCGATAAACCTCCCCGTCCATTCTCCTCCTTATTCGGTCGCGTCACTCCCAATGCCAAACCCGGTGCCGCTCTTGCTGCCGCCGCTGCTGCTTCCAGATCTGTTCCGACTCCGCATGCGGCCGCGATCATCTCCCGGAGGAAAAGTTCCAATTCGATCAGACCTGAATCCGATGGTTCCGATGTTTCTTCTAGTGGTGGTGGTGGTGAATTGGGGGAGAAGTTTGATTCTCTGGAAAGTAAAATTGAGGGGAGTAGTGAGAGTGTTGAATCTGTTGATGATGGAGAAATTGAAGCAGTTTTGGATGGTAGTGGTGGTGATTTTCAGGTGAAGAATGATTCTTCTCTTGTGAGTGAGGAGAAGAGTGATTTAGACGAGTGTTCTATTTCTCCTTCATTGGATGATGTTGAAAATGGTCATGATCATGAGAATGGTGTGAATTCTGCACCTTTTGATTATAATAATGATGGTTTTGGCGAAAAAACTAGTTTTGATTATATTGATGGTAAGGGAGTAAATGAAACGGAAGAAATAGTGAATGTTGTTAGTGTTGGTGGGGGTTTTGTGGAAgatattgggaatgaagtgaatgatggtggagttgatgataatgataatgatgatgatgatgttgatgGTAGTTCAATAGGAAATGTTTTTGAACTAGTGGAGGAGACACTTGAGGAATTGGAAAGTGTAATGGCTACAAAGAAAAAATCAGAGGCTTCAAAGAAGCCACTTGATTTGGCTGAGGAATTGGAGAAGAAGAATGCTTCAACTGGTTTGCATTTGGAAGAAGGTGCTGCTGCACAGCCAATGAGGCTTGAGGGCGTTCGGAGAGGGTCTATTGCGTTGGGATATTTTGATGTTGATGCTGACAATGTTATTACAAGGGCTATTTCATCGCAAATGTTTAGACGTGATCACGGTTCTGCTCAAGTTTTGGTGGTTCATGCTAATTACATCGCTGTTGGAATGACAAAAGGGCTGATTGTTGTAGTGCCTAGTAAATATTCCATTCATCACGCAGATAATACTGATGGAAAGATGTTGATGCTTGCTGTGCAAGGTGACCGATTACATGCTCCAGTGACGTCCATGTCTTTCAATCAGCAAGGAGATCTTCTTTTGGCTGGTTATGGTGATGGTCATGTTACACTTTGGGATGTGCAGAAAGGGGCTGTGGTAAAAGTTATTAGTGGAGAGCATACGGCACCAGTAGTGCATGCTTTTTTTCTAGGACAGGATCCTCAGAATCCTCGTCAATTTAAAGCAGTTACGGGTGATTGTAAGGGTCTGGTTCTCTTACATCATATCTCAGTGGTTGTTTTGATTAATAGGTTCAACATTAAAACTCAGTGTCTTCTTGATGGGCAAAGAACGGGCTTGGTGCTATCCGCTTCACCACTCCTTTCCGACGAATTCGGTGGAAGTGCCTCATCTTATTCTCAGGGAAACACCACGGTCTCAGCCAGCAGTATAAGTAGCATGGTCGGAGGTGTTGTTGGGGGAGATGCAGGTTGGAAACTCTTCAATGAAGGCTCTTCTCTGGTGGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGACTAAGTCCTAAATTGGAAGTCTATGCTCAACTCACTAGGCCAAATGGAATTCGGGAGGGTTCTATGCCGTATACTGCATGGAAATACATGGCACAAACACCTAGTTGTGCTGATAATACACCCGTAGATACTGCTGAAAGAGTTTCGTTGCTTGCAATTGCTTGGGAACGGAAAGTTCAGGTTGCAAAGTTGGTCAAATCAGAATTAAAAGTATATGGAGAATGGTTTCTTGACAGTGCGGCTATAGGTCTGGCATGGTTGGATGATCAGATGCTGGTAGTTCTCACTTCAACTGGACAACTGAATTTATTTGCAAAGGATGGAACTGTGATTCACCAAACAAATTTTGGTGTAGATGGTATTGGAGGAGATGAACTACTTTCTTATCATACTCACTTCATCAACATATATGGAAACCCTGAGAAAGCTTATCATAACTCCATTGCTGTAAGAGGAGCTTCTATTTATATACTTGGTCCAACACATCTTATTGTTTCTCGTCTTCTCCCTTGGAAAGAGCGCATCTTGGTTTTACGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGGCAATGACTCTTTATGATGGCCATGCTCATGGGGTTATTGATCTACCTAGAACCTTGGATGCTGTACATGAGGCTATAATGCCCTTCTTGGAGGAGTTGCTTACATCATATGTTGATGAAGTGTTCTCCTATATTTCAGTGGCTTTCTGCAATCAAATTGGAAAACCTGATCAATCCAATGATTCAAATAATAGAAGCAATTCAGTGCATTCTGAAATAAAGGATCAATACACGCGTGTTGGTGGAGTTGCCGTTGAATTTTGTTGTCATATCAAACGGACTGACATCCTTTTTGATAAAATTTCCTCGAAGTTCATGGATGTTCATGTTCGACAGAGAGAAACATTTTTGGAGCTTCTAGAGCCATATATTTTGAAGGACATGCTTGGATCTCTACCTCCTGAGATTATGCAAGAATTGGTAGAGTATTATAGCACGAAAGGGTGGCTGCAGAGGGTTGAGCAATGTGTACTTCACATGGATATTTCATCCTTGGATTTTAATCAGGTTGTCAGATTATGCCGGGAGCATGGACTATACAGTGCCCTGGTGTATCTCTTTAATAAAGGATTAGATGATTTTAGGGCACCTCTTGAGGAGCTCTTTGCAGTCCTACAAAATTGCCATAAAGAAAATGCTACTGCTCTAGGGTATAGAATGTTAGTTTATCTCAAGTACTGCTTTATAGGTCTTGCCTTTCCACCAGGCCGTGGAACTATTCCTCCTACGCGGTTGCCATCTCTTAGAAAAGAACTTGTAGAGTTTTTGTTAGAGGATTCCAGTGCTCCGAAATCACAGACAGTTTCAGATTCTGTGTCCAGACGGCCATACCTGAATCTATATCTTCTCTTAGAGTTAGACACTGTAGCTACATTAGATGTTCTCCGATGTGCTTTCATGAAAGATGAAATTTCAAATTCCAGCTCATCTTCACTGGATTCAGCAGATAGACCTATTGAAGAAGCAAAAGAAGAAAATAACAATGTTACTGAAACTGAAAATATTTTGGTTCAGCATACGGTGGATGCTCTTATTCAAATAATTGATATGAGTGTAGTTCCAACAGATACAACCTCTAGTAGCGGTGGTGAAGGGTTAAAAGATTGGCCTTCCAAGGACAAAGGTTGCCTGTTTGAGTTCATTGCACATTATGTTGCTCTCGAAAGAGCTAAAGTTTCAAAGGGCATACTTTGTCGAATATTGGAATATCTGACATCAGATAATCCCTTTTCAACTAATGTTTCTTCTCAGAGTTCAACTCCAAAAAGTAGAGAGAAGCAAGTGCTTGCACTTCTGGAAGTAGTTCCCGAGTCCGACTGGGATGCGCCATTTGTGCTAGACCTTTGTGAGAGAGCCAAATATCATAAGGTTTGTGGATTGATTCATTCCATCAGACATGAGTATGTGGCTGCATTGGATAGCTATATGAAAGATGTAGATGAGCCTGTTTATGCCTTCTCCTTTATCGACAAAGCATTCTCACAGTTGACTGGCAATGACCATGCTGCTATTCGATCAGCAGTTCTATCTCGAATTCCTGAATTGGTGGAACTAAGAAGGGAAGGTGCATTCCATATGGTTATCAGACATTTTAGTGATGAAAGTTCCCATATCATCAGTAAACTTCATTCTCATCCAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTGTCTAATTTGAGAAAGGATGATATTACGAATTCCCCTAATGGAAAACAGATTAAGGATCATTCACAAGGAGTCCATGATTATTTAGAAAATATATCCAATTTCCCCAAGTACATGCGTGAAAATCCTAGTCATGTGCCTGATGATCTTATTGAGCTGTACCTAGAGCTGTTGTGCCAGTATGAACGGGGTTCAGTTCTTAAGTTTCTAGAAATGTTTGACAGCTATCGTGTGGAACATTGTTTACGCCTGTGTCAAGAATATGGTATTATAGATGCTGCTGCTTTCTTATTGGAAAGGGTTGGTGACGTTGGTAGTGCTCTTTCACTTACACTTTCTGATCTGAATGAGAAATTTGTTGAGCTTGATGCTGCTGTTGAAGCTGTAGTTTTAAACCATCCCAAGCTTGATTCTTCCCATATGGAAATATTCAACAATGTTTTAAGAACAAAAGAGGTGAATGGCATGTACGATTTATTGCATGCCTGTATCGGTCTGTGTCAGAGGAACACACCTCGTCTAAATCCTGAGGAGTCAGAGTTACACTGGTTTAAATTACTTGACTCGTTTTGTGATCCATTGATGGATTCATATGTTGAAGAGAGAGCATATGAAAGAAATAATTATTTTGGTGTGCTAGCTGGATCTGCAGATTCACGACTGGACAAAGACACCTATAAAAGCGGTTGGAAGATTTCTAAGTCCCGAAATGGTGATATCTTGAGAAAACTGGTATCTCAGTTCATTAAAGAGATTGTTGAGGGAATGATAGGTTTCGTTCACCTTCCAGCTATCATGTCCAAACTCTTGTCTGATAATGGTAGTCAAGAATTTGGCTATTTCAAGCTTACCATATTGGGGATGCTGGCAACATATGGATTTGAAAGAAGAATTCTGGATGCTGCCAAATCCTTGATAGAAGATGATACATTCTATACCATGAGTTTACTCAAGAAAGGTGCCTCTCATGGGTTTGCTCCTAGGAGTTCAGTGTGCTGTATTTGTAATTGCCTCCTTACAAAGAACTCAGTTACCACTGGAATTCGAATTTTCAACTGTGGCCATGCAATTCATCTTCAGTGTGAAGTCTCTGAAATCGAGTCCTCAAGCAAAGGATCTTCATCTGGATGCCCTGTATGCATGCCAAACCAAACACCCCAGAAGTCTAGAAACAAATCAATCATTACAGAGAATGGCTTGGTCAATAAATCCTCATCAAGACGCCAACACCCTCATCATGGAAGTACAATTCATCACCATGACAATGATTTATCAGAGAATACATATGGAGGACAGCAACAGATATCACGGTTTGAGATATTGAGCAGCTTACAGAAAAATCAAAGATTTATGCAAATAGAAAACATGCCTCCATTGAGGCTTGCCCCACCTGCTGTGTACCATGAAAAGGTGAGTAGAGTAGCACATTATCTGACTGGAGAAAGTAGCAACAGTTCTGCAGTTATAGAGAAACAAAGTAGACACAAACAAAGCCGGGAGCTGAGAGTTAAAGGTTCATCGATTCGATTTCCTTTAAAATCAACTATATTTGGTAAGGAAAAGACAAATAAGCGGTGA 5670 0.4051 MELDLRSFLPDDADTELHNTPHRTVDEILNDCDTSSSSSTPSPPSSPSHHNNNNNTKPTHFPQPVPVSLSRIKPDKPPRPFSSLFGRVTPNAKPGAALAAAAAASRSVPTPHAAAIISRRKSSNSIRPESDGSDVSSSGGGGELGEKFDSLESKIEGSSESVESVDDGEIEAVLDGSGGDFQVKNDSSLVSEEKSDLDECSISPSLDDVENGHDHENGVNSAPFDYNNDGFGEKTSFDYIDGKGVNETEEIVNVVSVGGGFVEDIGNEVNDGGVDDNDNDDDDVDGSSIGNVFELVEETLEELESVMATKKKSEASKKPLDLAEELEKKNASTGLHLEEGAAAQPMRLEGVRRGSIALGYFDVDADNVITRAISSQMFRRDHGSAQVLVVHANYIAVGMTKGLIVVVPSKYSIHHADNTDGKMLMLAVQGDRLHAPVTSMSFNQQGDLLLAGYGDGHVTLWDVQKGAVVKVISGEHTAPVVHAFFLGQDPQNPRQFKAVTGDCKGLVLLHHISVVVLINRFNIKTQCLLDGQRTGLVLSASPLLSDEFGGSASSYSQGNTTVSASSISSMVGGVVGGDAGWKLFNEGSSLVEEGVVVFVTHQTALVVRLSPKLEVYAQLTRPNGIREGSMPYTAWKYMAQTPSCADNTPVDTAERVSLLAIAWERKVQVAKLVKSELKVYGEWFLDSAAIGLAWLDDQMLVVLTSTGQLNLFAKDGTVIHQTNFGVDGIGGDELLSYHTHFINIYGNPEKAYHNSIAVRGASIYILGPTHLIVSRLLPWKERILVLRKAGDWMGALNMAMTLYDGHAHGVIDLPRTLDAVHEAIMPFLEELLTSYVDEVFSYISVAFCNQIGKPDQSNDSNNRSNSVHSEIKDQYTRVGGVAVEFCCHIKRTDILFDKISSKFMDVHVRQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYLFNKGLDDFRAPLEELFAVLQNCHKENATALGYRMLVYLKYCFIGLAFPPGRGTIPPTRLPSLRKELVEFLLEDSSAPKSQTVSDSVSRRPYLNLYLLLELDTVATLDVLRCAFMKDEISNSSSSSLDSADRPIEEAKEENNNVTETENILVQHTVDALIQIIDMSVVPTDTTSSSGGEGLKDWPSKDKGCLFEFIAHYVALERAKVSKGILCRILEYLTSDNPFSTNVSSQSSTPKSREKQVLALLEVVPESDWDAPFVLDLCERAKYHKVCGLIHSIRHEYVAALDSYMKDVDEPVYAFSFIDKAFSQLTGNDHAAIRSAVLSRIPELVELRREGAFHMVIRHFSDESSHIISKLHSHPRSLFLYLKTLIELHLFGTLDLSNLRKDDITNSPNGKQIKDHSQGVHDYLENISNFPKYMRENPSHVPDDLIELYLELLCQYERGSVLKFLEMFDSYRVEHCLRLCQEYGIIDAAAFLLERVGDVGSALSLTLSDLNEKFVELDAAVEAVVLNHPKLDSSHMEIFNNVLRTKEVNGMYDLLHACIGLCQRNTPRLNPEESELHWFKLLDSFCDPLMDSYVEERAYERNNYFGVLAGSADSRLDKDTYKSGWKISKSRNGDILRKLVSQFIKEIVEGMIGFVHLPAIMSKLLSDNGSQEFGYFKLTILGMLATYGFERRILDAAKSLIEDDTFYTMSLLKKGASHGFAPRSSVCCICNCLLTKNSVTTGIRIFNCGHAIHLQCEVSEIESSSKGSSSGCPVCMPNQTPQKSRNKSIITENGLVNKSSSRRQHPHHGSTIHHHDNDLSENTYGGQQQISRFEILSSLQKNQRFMQIENMPPLRLAPPAVYHEKVSRVAHYLTGESSNSSAVIEKQSRHKQSRELRVKGSSIRFPLKSTIFGKEKTNKR 1889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02926 1889 MobiDBLite consensus disorder prediction 1104 1126 - -
Car07g02926 1889 Pfam Region in Clathrin and VPS 1413 1480 IPR000547 GO:0006886|GO:0016192
Car07g02926 1889 Pfam Golgi CORVET complex core vacuolar protein 8 913 1097 IPR025941 -
Car07g02926 1889 MobiDBLite consensus disorder prediction 1734 1792 - -
Car07g02926 1889 SUPERFAMILY RING/U-box 1695 1751 - -
Car07g02926 1889 ProSiteProfiles Zinc finger RING-type profile. 1696 1744 IPR001841 -
Car07g02926 1889 Pfam Anaphase-promoting complex subunit 4 WD40 domain 429 477 IPR024977 -
Car07g02926 1889 Gene3D - 369 511 IPR015943 GO:0005515
Car07g02926 1889 MobiDBLite consensus disorder prediction 207 226 - -
Car07g02926 1889 ProSiteProfiles Trp-Asp (WD) repeats profile. 437 471 IPR001680 GO:0005515
Car07g02926 1889 MobiDBLite consensus disorder prediction 117 137 - -
Car07g02926 1889 MobiDBLite consensus disorder prediction 147 161 - -
Car07g02926 1889 PANTHER - 239 1817 - -
Car07g02926 1889 MobiDBLite consensus disorder prediction 30 63 - -
Car07g02926 1889 MobiDBLite consensus disorder prediction 1734 1769 - -
Car07g02926 1889 MobiDBLite consensus disorder prediction 1846 1869 - -
Car07g02926 1889 CDD RING-H2 1696 1745 - -
Car07g02926 1889 PANTHER VACUOLAR PROTEIN SORTING VPS41 239 1817 IPR045111 GO:0006623
Car07g02926 1889 ProSitePatterns Trp-Asp (WD) repeats signature. 449 463 IPR019775 -
Car07g02926 1889 MobiDBLite consensus disorder prediction 1 199 - -
Car07g02926 1889 MobiDBLite consensus disorder prediction 1 29 - -
Car07g02926 1889 SUPERFAMILY WD40 repeat-like 393 712 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02926 K20178 - gmx:100780869 2706.4