Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02925 ATGGCAACAATGACAGCTTCAAGTAACATAGTATCCAGAAATTCTCATGCCCATGTGCCAACTGTTTCATGTGAGTCTAAGATGGCACCAATGAGACTTTGTTCTATAAGACAGGCCAATACTCATAATGGACTCAGAATTTTGAACTCATTGGATGAGCTACTAAATAGAACCCCAATTAAAATGAAGGGAGGCCAATCAAGGAGGAAGGGTCTTAAGAGCAAGAATGTTAGGCCTAGAGGTGTCATAATTTGTGGCATGAATTTGATCTTTGTAGGAACTGAGGTTGCTCCATGGAGTAAAACTGGTGGTTTAGGAGATGTTCTAGGAGGTCTTCCACCAGCATTAGCAGCTAATGGGCACAGAGTTATGACCATAAGTCCACGTTATGACCAATACAAAGATGCATGGGATACAAGTGTAATAATTGAGGTAAAAGTGGGCGATAGAATAGAAAAAGTTCGCTTCTTCCATTGCTTTAAAAGAGGAGTTGATCGCGTCTTCGTAGATCACCCTATATTTATCGAAAAGGTTTGGGGGAAAACTGGAACAAAACTTTATGGACCTGCTGCAGGAGATGATTACCAAGACAATCAACTACGTTTTAGCCTCTTCTGTCAGGCAGCTCTAGAAGCAGCAAGGGTTCTGAATCTTAAGAGCAATAAATATTTCTCAGGACCATATGGCGAGGATGTCATTTTTGTCGCTAATGATTGGCACACCGCCCTTATCTCTTGCTACATGAAATCTATGTACCAGTCAATTGGCGTCTTTAGAAATGCTCGAGTTGTCTTTTGTATCCACAACATTGCTTACCAAGGAAGATTTGCATTCACGGATTATGCTCTTCTTAATCTCCCTGACCAATTTAAAAGCTCCTTTGACTTCCTTGATGGGCATGTTAAACCAATTATTGGAAGAAAAATCAATTGGATGAAAGCTGGAATTTTAGAATCTCACCAGGTTTTAACTGTTAGTCCATACTACGCTCAAGAACTAGTGTCAGGCCCAGATAAAGGAGTTGAATTGGACAACATTCTTCGTCAAACCGGTGTTACTGGAATTGTTAATGGCATGGATGTTCAGGAGTGGAATCCATCCACTGACAAATATATAACAGTCAAATACGATGCTTCAACGGTATTGGAAGGAAAGGCTCTTCTGAAAGAAGCACTCCAAGCAGAAGTTGGATTGCCAGTTGACAGAAATATTCCTCTAATTGCTTTCATTGGTAGACTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGCAGCCATTCCTCAATTTATTAAGGAGGATGTTCAAATAGTAGCCCTAGGGACAGGAAAAAAAGAAATGGAAAAGCAACTTGAGCAACTTGAAATATCATACCCTGACAAAGCCAGAGGAGTTGCAAAATTCAATGTTCCCCTAGCTCACATGATAATTGCAGGAGCTGATTTTATATTGATTCCTAGTAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGAACTGTATAA 1515 0.4007 MATMTASSNIVSRNSHAHVPTVSCESKMAPMRLCSIRQANTHNGLRILNSLDELLNRTPIKMKGGQSRRKGLKSKNVRPRGVIICGMNLIFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTISPRYDQYKDAWDTSVIIEVKVGDRIEKVRFFHCFKRGVDRVFVDHPIFIEKVWGKTGTKLYGPAAGDDYQDNQLRFSLFCQAALEAARVLNLKSNKYFSGPYGEDVIFVANDWHTALISCYMKSMYQSIGVFRNARVVFCIHNIAYQGRFAFTDYALLNLPDQFKSSFDFLDGHVKPIIGRKINWMKAGILESHQVLTVSPYYAQELVSGPDKGVELDNILRQTGVTGIVNGMDVQEWNPSTDKYITVKYDASTVLEGKALLKEALQAEVGLPVDRNIPLIAFIGRLEEQKGSDILVAAIPQFIKEDVQIVALGTGKKEMEKQLEQLEISYPDKARGVAKFNVPLAHMIIAGADFILIPSRFEPCGLIQLQAMRYGTV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02925 504 Gene3D Glycogen Phosphorylase B; 360 504 - -
Car07g02925 504 Gene3D Glycogen Phosphorylase B; 89 359 - -
Car07g02925 504 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 87 504 IPR011835 GO:0004373
Car07g02925 504 Pfam Glycosyl transferases group 1 404 503 IPR001296 GO:0016757
Car07g02925 504 PANTHER GRANULE-BOUND STARCH SYNTHASE 1 504 - -
Car07g02925 504 CDD GT5_Glycogen_synthase_DULL1-like 88 504 - -
Car07g02925 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 82 504 - -
Car07g02925 504 Pfam Starch synthase catalytic domain 89 349 IPR013534 -
Car07g02925 504 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02925 Car-Chr7 55659737 55665174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02925 1 504 Glycosyltransferase AT1G32900 69.960 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02925 K13679 - gmx:100037476 818.92