Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02902 ATGATTTTTTACAAAACCATATTCCTAGTTCTCCTCACTGCCGTAGTTTGTTTCGTAATTCGATGGTTATTATTCAAAACGGGATTAATATACGCCACAAAGAAACTGCAAAGAAAGTTACAAGATTGTTTTCACGTTTACCAATACCTCAAAGTCCCCGAATTCAACGAAAACATGCAACGAAATGAGTTATACCGTAAAGTTTCTCTTTATTTACATTCTCTTCCTTCTCTCGAAGATTCTGATTTCACAAATCTCATTACCGGTCACAACCAAAACGATATCGTTTTATCAATAGACTCAAATCAATTAATCGAGGACCGTTTTCTCGGCGCTACTCTATTCTGGTCTAATAAAAAAACCGAACCGGACAGAACCGGTGCGTTCGTTCTCAAAATTAGGAAAACCGATAAACGCCGAATTCTGCGGAGTTATCTCCGCCATATTCACGACGTCTCCGACGAGATAACGAACAGAGGAGAACGTGATTTACAGTTATTCGTTAACGTCACCGGCAGTGACGGCGGTGGTGGCAGACGAACGAGGTGGAAATCTGTTGCGTTTACTCATCCAGCGACGTTTGAAACTATGGCGATGGAAACGGATCTGAAAAACAAAATCAAATCGGATCTCGAATCGTTTCTCAAAGCGAAGCAATACTATCGGCGAATTGGCCGAGCGTGGAAACGGAGCTTCCTTTTGTACGGTGAATCCGGTACCGGCAAATCGAGCTTCGTCGCCGCGATGGCGAATTTTCTTTCCTATGATGTTTATGACGTTGATCTCTCTAAGGTTCGCGGCGATTCAGATCTGAAGTTTCTCCTCTTAGAAACGACAGCGAAATCGATCGTCGTCGTGGAAGATCTCGACAGGTTTTTAACGGAGGAATCGGATTCGGCGGCGGTTACGGCGTCGGGAATTCAGAATTTCATGGACGGAATTCTAAGTTCTTGTTGCGGCGAAGAAAGAGTGATGGTGTTCACGATGAACAGTAAGGAGTTTATCGATCCGAATTTTCTTCGACCGGGTCGGGTTGACGTTCATATCCATTTTCCGGTTTGCGATTTCTCGTCGTTCAAGACGCTTGCGAATAGTTACCTTGGAGTTAAAGAACATAAGCTGTTTCCTCAGGTGGAGGAAATTTTCCGGCACGGCGCGAGTTTAAGCCCTGCCGAGATCGGTGAATTGATGATTGCGAATCGGAACTCACCGAGTCGGGCTATAAAATCGGTTATAGGGGCGTTACAAACTGACGGTGATGGGAGGGGGTATGGGGATATGATCGTACGGCAGATAGAGGATGGTGACGTGGACGAAGTTCAAAACGGTGTTCTATGTGGCGTTGATGGATTCTCTACGGTTAAGGATATACGGAAGCTGTATGGTTTGTTTAGATTGCGGAATGTCAAAAGAAATCGCTCGTCGAATTTATTGGTCAACGTGGGGGGATGA 1452 0.4477 MIFYKTIFLVLLTAVVCFVIRWLLFKTGLIYATKKLQRKLQDCFHVYQYLKVPEFNENMQRNELYRKVSLYLHSLPSLEDSDFTNLITGHNQNDIVLSIDSNQLIEDRFLGATLFWSNKKTEPDRTGAFVLKIRKTDKRRILRSYLRHIHDVSDEITNRGERDLQLFVNVTGSDGGGGRRTRWKSVAFTHPATFETMAMETDLKNKIKSDLESFLKAKQYYRRIGRAWKRSFLLYGESGTGKSSFVAAMANFLSYDVYDVDLSKVRGDSDLKFLLLETTAKSIVVVEDLDRFLTEESDSAAVTASGIQNFMDGILSSCCGEERVMVFTMNSKEFIDPNFLRPGRVDVHIHFPVCDFSSFKTLANSYLGVKEHKLFPQVEEIFRHGASLSPAEIGELMIANRNSPSRAIKSVIGALQTDGDGRGYGDMIVRQIEDGDVDEVQNGVLCGVDGFSTVKDIRKLYGLFRLRNVKRNRSSNLLVNVGG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02902 483 CDD AAA 229 352 - -
Car07g02902 483 ProSitePatterns Sigma-54 interaction domain ATP-binding region A signature. 232 245 IPR025662 -
Car07g02902 483 PANTHER BCS1 AAA-TYPE ATPASE 8 436 - -
Car07g02902 483 Pfam Domain associated at C-terminal with AAA 31 118 IPR025753 -
Car07g02902 483 Pfam ATPase family associated with various cellular activities (AAA) 233 352 IPR003959 GO:0005524|GO:0016887
Car07g02902 483 Gene3D - 182 353 IPR027417 -
Car07g02902 483 PANTHER BNAC04G00800D PROTEIN 8 436 - -
Car07g02902 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 410 IPR027417 -
Car07g02902 483 SMART AAA_5 228 355 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02902 Car-Chr7 55017488 55019596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02902 193 346 Miscellaneous Gene Families AT5G58870 28.235 2.57e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02902 - K08900 gmx:100792584 687.182