Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02887 ATGGTTAACTTAGTCACCTTGTTAGTGTTGTGGTTTAGTGTGATATGTACTATCTACAATGTGAAACTTATGGTACATGGAAGTGCAAGGAGTGAATCAACAAGGTTCTATGATTTCAAGGTTCAAACTAAAAGAGTTGCCAAACTTTGCAACTCCAAAGACATTGTCACAGTCAATGGTATGTTTCCAGGACCTGTTGTTTATGCACAAGAAGATGATAGAATCATAGTCAAGGTTACCAATGAGACACCTTTCAATGTTACAATTCACTGGCATGGTATTCGACAAAGACGATCATGCTGGTATGATGGACCATCCTATATTACACAGTGTCCAATTCAAGCAGGCCAGAGTTTCACCTATAATTTTACAGTGGAGAATCAGAAGGGAACTTTCTTCTGGCATGCTCATGTTTCTTGGCTAAGAGGAACTGTTCATGGAGCTATGGTTGTTTATCCAAAGAATATGGTACCTCTCCCATTTAAGATTCCTTATCAAGAGCAAATAATCATACTAGGTGAATATTGGCTGCAGGATCTCCAACAAATTGAGCATTCCACTCTAGTGAGTGGAGGAGCTCCACCTAAAGCAGATGCGTATACCATCAACAGTCATCCAGGCCCCAACTACAACTGCTCCATTAATGATGTGTACCAACTTAATGTGATTCAGGGAAAGACCTACTTGTTAAGACTGATTAATGCGGGTTTAAACACTGAGAACTTCTTTGCCATTGCTAATCATAACGTAACAATCGTGGAAGCTGATGGTGAATACACAAAGCCGTTCGCCACAGACATGGTTATGCTTGGACCAGGCCAAACATTAAATGTTCTAGTCTCAGCTGATCAACCAGTAGGAAAATACTCCATGGTTGTGGCACCTTACAAATCTGGCAGGATTGTCAAATATCAAAATGTTTCAGCCATTGCCTACTTCAACTATATAGGGGCCGCATCAGATAGTTCATATTTACCAGCTAAATTGCCTAAACTTGATGATAAGCTAGCTGTTAAGAGATTCATGGATGGATTAAGGAGCCTAAATCTAGCAAATGTTTTCAAAGAAATTGATAAAAACATATTCATCACCATTGGATTGAATGTTCAAAAGTGCCATTCAAAGACACCAAAGCAAAACTGTCAAGCCATGAATAATGGCGTGCTGACTGCTTCCATGAACAATATAAGTTTTGTTCATCCCAGTATTTCAATCCTTGAAGCTTATTATAAAAAGATCAATGGATCATATACTGAAGATTTTCCCGATGCACCCTCTAAGTTCTATGACTTCGTTAATGGTGCCCCTAATAACATTCCGTACGACACAGAGTCGTTGAATGGGACTAGAACTAAGGTCCTTGAATATGGTACCAAGGTGCAACTCATTTTGCAGAACACAGGGACAGTCAATATTGAAAACCACCCAATTCACATCCATGGCTACAGCTTTTATGTTGTAGGATATGGCACAGGAAACTATGATCCACTAGCTGCACAATTCAATTTAGTGGATCCCCCGTACATGAATACAATTGGAGTTCCGGTCGGTGGATGGGCAGCAGTCCGTTTCGTAGCTGATAATCCAGGTGTGTGGTACATGCACTGCCACATTGATATACACCAATCATGGGGACTAGGAATGGTATTTATAGTGAAGAATGGAAAAGGAGATTTGGAGTCCTTACCACATCCCCCACCTGACCTGCCACCATGTTAA 1719 0.4043 MVNLVTLLVLWFSVICTIYNVKLMVHGSARSESTRFYDFKVQTKRVAKLCNSKDIVTVNGMFPGPVVYAQEDDRIIVKVTNETPFNVTIHWHGIRQRRSCWYDGPSYITQCPIQAGQSFTYNFTVENQKGTFFWHAHVSWLRGTVHGAMVVYPKNMVPLPFKIPYQEQIIILGEYWLQDLQQIEHSTLVSGGAPPKADAYTINSHPGPNYNCSINDVYQLNVIQGKTYLLRLINAGLNTENFFAIANHNVTIVEADGEYTKPFATDMVMLGPGQTLNVLVSADQPVGKYSMVVAPYKSGRIVKYQNVSAIAYFNYIGAASDSSYLPAKLPKLDDKLAVKRFMDGLRSLNLANVFKEIDKNIFITIGLNVQKCHSKTPKQNCQAMNNGVLTASMNNISFVHPSISILEAYYKKINGSYTEDFPDAPSKFYDFVNGAPNNIPYDTESLNGTRTKVLEYGTKVQLILQNTGTVNIENHPIHIHGYSFYVVGYGTGNYDPLAAQFNLVDPPYMNTIGVPVGGWAAVRFVADNPGVWYMHCHIDIHQSWGLGMVFIVKNGKGDLESLPHPPPDLPPC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02887 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Car07g02887 572 Gene3D - 12 153 IPR008972 -
Car07g02887 572 SUPERFAMILY Cupredoxins 355 572 IPR008972 -
Car07g02887 572 Gene3D - 370 572 IPR008972 -
Car07g02887 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Car07g02887 572 Gene3D - 165 350 IPR008972 -
Car07g02887 572 Pfam Multicopper oxidase 168 317 IPR001117 -
Car07g02887 572 TIGRFAM laccase: laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
Car07g02887 572 SUPERFAMILY Cupredoxins 32 176 IPR008972 -
Car07g02887 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Car07g02887 572 PANTHER MULTI-COPPER OXIDASE 17 572 IPR045087 -
Car07g02887 572 PANTHER LACCASE-6 17 572 - -
Car07g02887 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Car07g02887 572 SUPERFAMILY Cupredoxins 165 323 IPR008972 -
Car07g02887 572 Pfam Multicopper oxidase 443 555 IPR011706 GO:0005507|GO:0016491
Car07g02887 572 Pfam Multicopper oxidase 41 155 IPR011707 GO:0005507
Car07g02887 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02887 Car-Chr7 54837503 54840794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02887 K05909 - gmx:100789406 978.393