Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02885 ATGACAGTGTTAACAGTGAAAACCCCACATAAAATGCAATCATTTGGTATTTTCCTCCGTGAACCGCCGCAAAATGAAACCACCGTCACCGGCGACCACCGTAACACATCACCGGCGATGAAGAAAACAATCAAGAAGACAATAATCACAGACGAAACTTCACTAGAAAACCCTGATTTGGGTCCATTTCTTCTGAAGATGGCACGTGACAGCATAGCTTGTGGCAGTGAGAATCTTGATAAGGCTTTGGATTATGCTATTCGGGCTTCGAAATCGTTTGAACGGGTTTCGGGTTCGGGTGTGGATCTTGCCACGTGTCTTCATGTTGTGGCTGCTATTTATAGTAGTTTGGGGAGGTTGGATGAGGCTATTGAGGAATTGGAAAGGTCCATTTTGATGTTGGATGTTGAAAATGGGTCTGGTGTTGGTATGGTGAAATTTTGTGGGTATATGCAACTTGGTGATACTTATTCTATGACTGGAATGTTGGATAGATCCATTTTCTGTTATGAATCGGGTTTGAAGATTCAAATTGATGTTTTGGGTAAGTCTGATCCAAGAGTTGCTGAAACTTGCAGGTACTTAGCGGAAGCACATGTTCAAGCCATGCAATTTGATGAGGCAGAACACTTCTGCAAGAAAACACTGGAAATTCATAGGGAGCATTGCTCGCCAGCTTCCCTAGCTGAAGCAGCCGACCGACGTCTCATGGCCCTTATATGTGAAGCAAAGGGAGACTATGAACCAGCACTTGAGCACCTTGTCCTTGCCAGCATGTCAATGATTGCCAACGGACAAGATAATGAGATTGCAGCTATTGATGTTAGCATCGGAGATATTTACTTGTCGCTGTGTCGGTTTGACGAGGCTGTTTTCTCCTATCAGAAAGCACTGACAGTGTTCAAATCCACCAAAGGTGAAAATCACAGTTCTGTTGCTTTAGTCTACATTCGCCTTGCTGATCTTTACTACAAGACAGGAAAATTACGAGAGTCGACATCCTATTGTGAAAATGCATTAAGAATTTACAGTAAACCTGTGCCTGGAACAACTGCTGGTGAGATTGCAAGTGGATTGACTGAAATATCTGCAATCTACGAAGCGCTTAATGAGCCCGAGGAGGCGCTGAAGCTCTTGCAAAAGGCGGTGAAATTATTGGAGGGTATCCCTGGACAATATAGGACAGTGGCAGGAATAGAAGCTCAAATGGGAGTAATGTTCTACATGGTTGGTCGGCATGTCGATGCTTGGAAATCTTTTGATAGTTCCGTTACAAAGCTGAGAGCTGGCGGGGAGAGGAAGTCGGCTTTTTTCGGATTTGTGTTGAACCAGATGGGCTTGGCATGTGTTCAACTCTATAAAATAGAAGAGGCTGCTACACATTTTGAAGAAGCTAGAGAGATCTTGGAGAGGGAGTGTGGAACCTATCATTTGGACACTCTTGGTGTATATAGCAACCTAGCTGCGACTTACGATGCCTTGGGAAGAGTTGAAGATGCTATTCGAATATTGGAATACATACTAAAGATGAGAGAAGAAAAACTTGGAACTGCAAATCCAGATGTTGATGATGAAAAGAAAAGATTGTTTGAACTTTTGAAAGAAGCGGGAAGAGTTCGGAATAGAAAAGGAAAATCTCTTGAAAACCTTATAGATTCGAACTCGTTGAAGATGAAGAAGGAAGGAAGAAGGAGATGGGGTGCATTTAGTTTTAGAACTTAG 1722 0.4292 MTVLTVKTPHKMQSFGIFLREPPQNETTVTGDHRNTSPAMKKTIKKTIITDETSLENPDLGPFLLKMARDSIACGSENLDKALDYAIRASKSFERVSGSGVDLATCLHVVAAIYSSLGRLDEAIEELERSILMLDVENGSGVGMVKFCGYMQLGDTYSMTGMLDRSIFCYESGLKIQIDVLGKSDPRVAETCRYLAEAHVQAMQFDEAEHFCKKTLEIHREHCSPASLAEAADRRLMALICEAKGDYEPALEHLVLASMSMIANGQDNEIAAIDVSIGDIYLSLCRFDEAVFSYQKALTVFKSTKGENHSSVALVYIRLADLYYKTGKLRESTSYCENALRIYSKPVPGTTAGEIASGLTEISAIYEALNEPEEALKLLQKAVKLLEGIPGQYRTVAGIEAQMGVMFYMVGRHVDAWKSFDSSVTKLRAGGERKSAFFGFVLNQMGLACVQLYKIEEAATHFEEAREILERECGTYHLDTLGVYSNLAATYDALGRVEDAIRILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRNRKGKSLENLIDSNSLKMKKEGRRRWGAFSFRT 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02885 573 Pfam Tetratricopeptide repeat 270 344 - -
Car07g02885 573 Pfam Tetratricopeptide repeat 442 513 - -
Car07g02885 573 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 40 573 - -
Car07g02885 573 Gene3D Tetratricopeptide repeat domain 257 437 IPR011990 GO:0005515
Car07g02885 573 Gene3D Tetratricopeptide repeat domain 149 256 IPR011990 GO:0005515
Car07g02885 573 Gene3D Tetratricopeptide repeat domain 44 140 IPR011990 GO:0005515
Car07g02885 573 ProSiteProfiles TPR repeat profile. 271 304 IPR019734 GO:0005515
Car07g02885 573 PANTHER KINESIN LIGHT CHAIN-LIKE PROTEIN 40 573 - -
Car07g02885 573 SUPERFAMILY TPR-like 150 254 IPR011990 GO:0005515
Car07g02885 573 Gene3D Tetratricopeptide repeat domain 438 548 IPR011990 GO:0005515
Car07g02885 573 Pfam MalT-like TPR region 108 255 IPR041617 -
Car07g02885 573 SMART tpr_5 271 304 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 356 389 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 313 346 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 481 514 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 104 137 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 439 472 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 147 180 IPR019734 GO:0005515
Car07g02885 573 SMART tpr_5 189 222 IPR019734 GO:0005515
Car07g02885 573 Coils Coil 117 137 - -
Car07g02885 573 SUPERFAMILY TPR-like 186 511 IPR011990 GO:0005515
Car07g02885 573 SUPERFAMILY TPR-like 75 176 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02885 Car-Chr7 54817136 54820927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02885 - - gmx:100794697 905.59