Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02858 ATGGCTAGAGTTAAGCACATTCCTCCTCCTCGTAATCGCGCTGTAAGTGAGGATCAGAAACATAAGAAAAGACGCAATAAGCCTGGAACAGTAGCGCTTCGCGAGATTCGTCGTTTTCAAAAGACTTTCAATTTGGTTATACCAGCTGCTCCATTTATAAGATGCGTCAAACAGATTACGAACCAAACATCTTCACATGTCTCACGTTGGTCGCCGGAAGCAGTAATAGCACTTCAGGAGGCGGCTGAGGATTATCTGGTTCATATGTTTGAAAATGGAATGCTATGTGCCCTTCATGCAAGGCGTATTACCCTTATGAAAAAGGATATTGAGTTGACCCGTAGGCTTACAGGAATAGGAAGGCCTTGGTGA 372 0.4409 MARVKHIPPPRNRAVSEDQKHKKRRNKPGTVALREIRRFQKTFNLVIPAAPFIRCVKQITNQTSSHVSRWSPEAVIALQEAAEDYLVHMFENGMLCALHARRITLMKKDIELTRRLTGIGRPW 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02858 123 Gene3D Histone, subunit A 2 119 IPR009072 GO:0046982
Car07g02858 123 PANTHER HISTONE H3 13 123 IPR000164 GO:0000786|GO:0003677|GO:0030527
Car07g02858 123 SMART h35 18 121 IPR000164 GO:0000786|GO:0003677|GO:0030527
Car07g02858 123 Pfam Core histone H2A/H2B/H3/H4 12 116 IPR007125 GO:0003677
Car07g02858 123 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 13 123 - -
Car07g02858 123 PRINTS Histone H3 signature 18 39 IPR000164 GO:0000786|GO:0003677|GO:0030527
Car07g02858 123 PRINTS Histone H3 signature 65 83 IPR000164 GO:0000786|GO:0003677|GO:0030527
Car07g02858 123 PRINTS Histone H3 signature 83 99 IPR000164 GO:0000786|GO:0003677|GO:0030527
Car07g02858 123 PRINTS Histone H3 signature 99 120 IPR000164 GO:0000786|GO:0003677|GO:0030527
Car07g02858 123 MobiDBLite consensus disorder prediction 10 29 - -
Car07g02858 123 MobiDBLite consensus disorder prediction 1 29 - -
Car07g02858 123 SUPERFAMILY Histone-fold 10 119 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02858 Car-Chr7 54329702 54335564 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02858 K11253 - gmx:100811872 176.792