Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02746 ATGCACAACAAGGAAGAAGTGTTCAAATTTCTCGGATGCGTTCCGTTACTACAGAGACTTCCTAGTTCGTCTGTAAGGAAGATATCAGAAGTTGTGGTTGTTAAACACTATGAGCGAGGGGAGTATGTTGTCCGTGAGGGTGAACCAGGAGAGGGCACTTACTTCATATGGGATGGAGAGGCTAAGGTTGTTGGATCTGTTGATGCCAATGATGAAAATCGTCCAGAGTTCCAATTGAATAAATACGACTACTTTGGTTATGGTTTGTCAAATACAGTTCACCACACAGATGTTGTTGCTTTGTCTAAGCTAACATGCTTAGTGCTGCCCCATGAGCACTTGGCACTGCTATGGCCAAAGTATATACAGAGCGCAGAAAAATGTCCTGAGCCATGCACACGTGTGGAGAATATATTGCAATTGGAACCATTAGAGGTAGATACCTTCCAAGGAGTCACTCTTCCAGATGCTCCAAGATTTGGAAAGGTGTTTGGTGGACAGCTGGTTGGACAGGCACTAGCTGCAGCATCAAAATCTGTCGACTGTCTTAAGTTACTGCATAGTGTGCATGCCTATTTTCTTCGTATAGGAGACATAAACATGCCTATTATATATAAAGTTCATCGTCTCCGTGATGGAAGGAGCTTTGCTATGCGGAAAGTGGATGCAATGCAAAAGGGAAATGTCATATTCACTTTGCTGGCTTCATTTCATAGTGAAGAATCGGGATTTGACCACCAGGAAGTAGCCATGCCATCTGTCCCTGCACCAGAAATGCTTCTGCCGATAGAAGAGCTACGGGAGAGTCGTCTAACTGACCCTCGCTTGCCAATAATTTACCGGAACAAAGTGGCTACAACTGAGTTCATCCCCTGGCCCATAGAGATACGGTTTTGTGAACCTACTATTGCAACAAATCATACTAAATCTCCTCCCAGTTTGAGATACTGGTTTCGAGCAAAGGGAAAACTTTCAGATGACCAGGCTCTGCATAGGTGTGTGGTGGCATATACTTCAGATCTATTATTTCTTCAAGTAAGTTTGAATCCCCATCGCGAGAAAGGTTTCAGGGCACGTGGTGTTAGTCTGGACCATGCCATGTGGTTTCACCGACCCTTGAAAGCTGATGAATGGATTCTATTTTTGGTCTTCACTCCTACGGCCTATGAAGCACGAGGCTTTGTCGTAGGTCAAATGTTCAATCAGAAGGGAAAGCTTCTTGTGACAGTGGTTCAAGAAGGTCTAACCAGGAAAGTTATTCCCGAAACTTCAGCCAGCAAAATGTAG 1287 0.4429 MHNKEEVFKFLGCVPLLQRLPSSSVRKISEVVVVKHYERGEYVVREGEPGEGTYFIWDGEAKVVGSVDANDENRPEFQLNKYDYFGYGLSNTVHHTDVVALSKLTCLVLPHEHLALLWPKYIQSAEKCPEPCTRVENILQLEPLEVDTFQGVTLPDAPRFGKVFGGQLVGQALAAASKSVDCLKLLHSVHAYFLRIGDINMPIIYKVHRLRDGRSFAMRKVDAMQKGNVIFTLLASFHSEESGFDHQEVAMPSVPAPEMLLPIEELRESRLTDPRLPIIYRNKVATTEFIPWPIEIRFCEPTIATNHTKSPPSLRYWFRAKGKLSDDQALHRCVVAYTSDLLFLQVSLNPHREKGFRARGVSLDHAMWFHRPLKADEWILFLVFTPTAYEARGFVVGQMFNQKGKLLVTVVQEGLTRKVIPETSASKM 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02746 428 SMART cnmp_10 16 129 IPR000595 -
Car07g02746 428 Pfam Thioesterase-like superfamily 162 415 - -
Car07g02746 428 PANTHER ACYL-COA THIOESTERASE 52 427 - -
Car07g02746 428 CDD CAP_ED 16 127 IPR000595 -
Car07g02746 428 Pfam Cyclic nucleotide-binding domain 35 115 IPR000595 -
Car07g02746 428 Gene3D - 130 419 IPR042171 -
Car07g02746 428 ProSiteProfiles cAMP/cGMP binding motif profile. 16 86 IPR000595 -
Car07g02746 428 Gene3D Jelly Rolls 1 128 IPR014710 -
Car07g02746 428 SUPERFAMILY cAMP-binding domain-like 5 123 IPR018490 -
Car07g02746 428 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 249 418 IPR029069 -
Car07g02746 428 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 134 243 IPR029069 -
Car07g02746 428 CDD Thioesterase_II_repeat1 314 415 - -
Car07g02746 428 CDD Thioesterase_II_repeat2 147 238 - -
Car07g02746 428 PANTHER ACYL-COA THIOESTERASE 52 427 IPR003703 GO:0006637|GO:0047617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02746 Car-Chr7 52674665 52685005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02746 3 421 Acyl Lipid Metabolism Gene Families AT1G01710 63.962 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02746 K01068 - gmx:100803260 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01545 03 61010538 61020004 Car07g02746 07 52674665 52685005 PCT