Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02744 ATGTCCTCTGAACTAATATCAATGGAGCATTTAGATGATGGTGAGGCATCATCAAATAATGTTGATGAAGTAGAAGTCACTAATACTCCTCTGATTTGTGGCCTTCCAGATGATATTTCTCTTTTGTGCCTTGCAAGAGTTCCTAGAAAATATCATTCAGTTCTAAAGGCTGTCTCGAAAAGATGGAGGGACTTAGTTTGCAGTGACGAGTGGTTTTTTTATCGCAGAAAGCATAAACTCGATGAGACATGGATCTATGCTTTGTGCAGGGACAAATTTGATCATGTTTGCTGTTACATTTTGGATACAACCTCCTCAAGAAAATCTTGGAAGCTCATTCACGGGCTTCCACCTCACATCATGAAAAGGAAAGGCATGGGTTTTGAAGCTTTGGGAAACAAGCTCTTCTTATTGGGTGGTTGTGGCTGGTCTGAAGATGCTACTGACGAGGTTTATTCATACAATGCTTCCTCGAACTCTTGGGTTGAAGCTGCTTACTTGTCAACTGCTAGGTGCCACTTTGCTTGTGAAGTAATGGACGAAAAACTCTATGCAATTGGCGGTATAGGTTCAAATTCAAGTGATCCTCATTCATGGGATACTTTTGATCCTTTCACAAATAGTTGGACATCTCACAGAGACCCTAACATTGTTCCCGAAATCGAAGATTCGGTAGTTATGGACGGCAAGATATATATCCGATGTGGCAAATCTCCTGTAACACCTCACGTGTACGCCGTTGTATACGAACCATCAAGTGGAACATGGCAGCATGCAGATGCCGACATGGTTTCGGGATGGAGAGGTCCTGCAGTTGTTGTCGACGGAATCCTTTTCGTTTTGGATCAAAGTTTGGGTACTAGGTTAACGATGTGGCATAAAGAGCGACGCGAGTGGATACCCGTTGGAAAGTTGTCACCATTGCTTACAAGACCACCATGCCAACTTGTTGCAGTTGGTAAAAGCATTTATGTTATTGGGAAAGGGCTTAGTACTGTGGTTGTTGATGTTGGTGATGTGGGAAATATGGGAAGGGTGATGATGGGTTCATCTATACCCAAATTAGTCTCTGATTACAATGTAATTAGTTGTAAATGCTTGTCAATTTAA 1110 0.4198 MSSELISMEHLDDGEASSNNVDEVEVTNTPLICGLPDDISLLCLARVPRKYHSVLKAVSKRWRDLVCSDEWFFYRRKHKLDETWIYALCRDKFDHVCCYILDTTSSRKSWKLIHGLPPHIMKRKGMGFEALGNKLFLLGGCGWSEDATDEVYSYNASSNSWVEAAYLSTARCHFACEVMDEKLYAIGGIGSNSSDPHSWDTFDPFTNSWTSHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTPHVYAVVYEPSSGTWQHADADMVSGWRGPAVVVDGILFVLDQSLGTRLTMWHKERREWIPVGKLSPLLTRPPCQLVAVGKSIYVIGKGLSTVVVDVGDVGNMGRVMMGSSIPKLVSDYNVISCKCLSI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02744 369 MobiDBLite consensus disorder prediction 1 20 - -
Car07g02744 369 SMART fbox_2 35 74 IPR001810 GO:0005515
Car07g02744 369 SUPERFAMILY F-box domain 30 95 IPR036047 GO:0005515
Car07g02744 369 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 16 353 - -
Car07g02744 369 Pfam Kelch motif 123 166 IPR006652 GO:0005515
Car07g02744 369 Pfam Kelch motif 170 210 IPR006652 GO:0005515
Car07g02744 369 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 16 353 - -
Car07g02744 369 SUPERFAMILY Kelch motif 86 330 IPR015915 GO:0005515
Car07g02744 369 Gene3D - 75 342 IPR015915 GO:0005515
Car07g02744 369 Pfam F-box domain 33 70 IPR001810 GO:0005515
Car07g02744 369 SMART kelc_smart 134 181 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02744 Car-Chr7 52664526 52667914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02744 35 310 Miscellaneous Gene Families AT4G33900 25.081 7.38e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02744 - - gmx:100798211 590.882