Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02720 ATGTCTTGTAATGGTTTTCTACATAGGTATGCAGTTGTGACAGGAGCAAACAAAGGAATTGGATTTGAGATATGCAAGCAATTAGCTTCTAAAGGAATCACAGTGATTGTAACAGCAAGAGATGAGAGAAGGGGTATTGAAGCTCTTGATAAACTCAAGCAACACATTGATCTTAATCTCTCTCATAATAACAATGTGCTTTTCCATCAACTTGATGTTACTGACCCTAATAGTATAGCATCTCTTGAAAATTTCATCAGAACCCACTTTGGAAAACTTGATATCTTGGTGAATAATGCAGGACTACTAACTGAGAAGGAGGAATTAACTGAAGCATGTATTAAAACAAATTACTATGGAGCTAAAGGATTAACCAAAGCACTTATTCCTCTTCTCCAATTTTCTAGCTCACCAAAAATTGTCAATGTTTCCTCATCCATGGGAAGGCTAGAGAACATTCCAAATGGATGGCCTAAAGAAGTACTAAGTGATGTTGAAAACCTTACAGAAGAAAAAATTGACCAAGTTTTGAATGAGTTTCTCAAGGATTTTAAAGAAGGTTCATTAGAATCCAAAGGTTGGCCTCTTAATGTGAGTGCATATTCTGTCTCAAAAGTTGCTCTAAGTGCCTACACACACTACGCCAAAAAtgacatttaa 660 0.3561 MSCNGFLHRYAVVTGANKGIGFEICKQLASKGITVIVTARDERRGIEALDKLKQHIDLNLSHNNNVLFHQLDVTDPNSIASLENFIRTHFGKLDILVNNAGLLTEKEELTEACIKTNYYGAKGLTKALIPLLQFSSSPKIVNVSSSMGRLENIPNGWPKEVLSDVENLTEEKIDQVLNEFLKDFKEGSLESKGWPLNVSAYSVSKVALSAYTHYAKNDI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02720 219 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 IPR002347 -
Car07g02720 219 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 201 219 IPR002347 -
Car07g02720 219 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 IPR002347 -
Car07g02720 219 Gene3D - 6 219 - -
Car07g02720 219 PANTHER SALUTARIDINE REDUCTASE-LIKE 102 213 - -
Car07g02720 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 216 IPR036291 -
Car07g02720 219 PANTHER SALUTARIDINE REDUCTASE-LIKE 8 103 - -
Car07g02720 219 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 8 103 - -
Car07g02720 219 Pfam short chain dehydrogenase 10 151 IPR002347 -
Car07g02720 219 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Car07g02720 219 PRINTS Glucose/ribitol dehydrogenase family signature 91 102 IPR002347 -
Car07g02720 219 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Car07g02720 219 PRINTS Glucose/ribitol dehydrogenase family signature 201 219 IPR002347 -
Car07g02720 219 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 102 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02720 Car-Chr7 52307107 52308319 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02720 9 156 Acyl Lipid Metabolism Gene Families AT3G55290 30.818 2.24e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02720 K15095 - gmx:100803877 287.73