Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02718 ATGTTTCTCCTTCTCCTTATTTTCATCTCTTCATTACAATCATCAAATGCTTATCCATTATCAACAAAATCAAGATGGATCATAGATGATTCAACAAGTGAACGAGTGAAACTTGTTTGTGGCAATTGGGCTGGTCACCTTCAACCAATGATCCCTGAGGGTCTTGATAGAAGACCTCTAAAGGAACTTGTTGGTGAACTTGTACAAAAAAAATTCAATTGTGTTAGATTAACATATGCAATTTACATGTGGACAAGACATGGACATGACATTGTTAATGAAACTTTTAGTGATTTGGATGCACCTGAGGCTGTGGATGGTATTGCTAAGTATAATCCTTTTGTTTTGAAAATGACTCACATTGAAGCTTTTGATGCTGTGGTTAATGAACTTGCTGCTCAAAATGTTAAAGTGTTGCTTGATAATCATGTTAGTGAACCTAAATGGTGTTGTAATGATGATGATGGAAATGGTTTCTTTTATGATAGACATTTTGATCCTCAAGAATGGATTCATGGACTTACTTTGGCAGCCAAACACTTTAATGGACATCATCATGTTGTAGCAATGAGCTTAAGGAATGAATTACATGGTCCACGCCAAAATCTAAAAGATTGGTACAAATACATGAGCCAAGCAGCACTATCCATTCATAAGGCAAATCCAAATGTGCTTGTGGTTATCTCAGGTTTAATCTATGACACAGAGTTACAATTTTTAAGGAACAAACCATTGAACATAGACATAGGTAAAAAAATGGTGTATGAAACACATTTGTATTCATTTTCTGGAATTGGAACACTCAAATTGAGAGATATTTGGACTAAACAACCATTGAATAGAATATGCGCAAATACCGTTAGAGGGTTGGATCAAAGAGCTGGTTTTCTTACAATTGGTGAGAATGCAGTTCCTTTGATTATATCAGAGTTTGGATTTGATCAGACAGGTTCTTCAGTTGAGGATAACAGGTTTTTGACATGTCTTCAAACATATCTTGTTGGAAGAGACTTGGATTGGGGTTTATGGGCTTTTCATGGTAGTTATTATGTTAGAGAAGACAAAGTTCAGCTTGATGAGTCATTTGGTGTTTTGGATGCTACTTGGCATAACCTTAGGTACCCTAATTTCACTGACAAGTTCCAACTCTTGCAAAGGATGAATCAAGATCCTACTTCCAAACTCCCCAAAGCATATATCATGTACCACCCTCTTACTGGTAAATGTGCACAAGTGAATGAAAAGAATGAACTTGAAATTGGTAGTTGTGGAGAGAATAAAAATAGATGGATATATGATGGATCTCAAATCTTATGGAATGGAACTAAAAAGTGCTTAACTGCATCTGGTGAAGATCTTCCAGTTTCTGTTTCTGATGATTGCAAAAGCAAGAACAGTTCATGGAAACCTGTATCACTTTCTAGGCTTCATTTGGCTACATCACATGATCAAAATGGAAAACAACTTTGCTTGCATAAGGATTCAAATTCTTCTGTTGTTGTAACTTCAAAATGTATTTGCATAAATGATGATTCTCTTTGTCTTGATGATCCTCAGAGTCAATGGTTCCAACTTGTTGCCACCAATGTTTAG 1593 0.3578 MFLLLLIFISSLQSSNAYPLSTKSRWIIDDSTSERVKLVCGNWAGHLQPMIPEGLDRRPLKELVGELVQKKFNCVRLTYAIYMWTRHGHDIVNETFSDLDAPEAVDGIAKYNPFVLKMTHIEAFDAVVNELAAQNVKVLLDNHVSEPKWCCNDDDGNGFFYDRHFDPQEWIHGLTLAAKHFNGHHHVVAMSLRNELHGPRQNLKDWYKYMSQAALSIHKANPNVLVVISGLIYDTELQFLRNKPLNIDIGKKMVYETHLYSFSGIGTLKLRDIWTKQPLNRICANTVRGLDQRAGFLTIGENAVPLIISEFGFDQTGSSVEDNRFLTCLQTYLVGRDLDWGLWAFHGSYYVREDKVQLDESFGVLDATWHNLRYPNFTDKFQLLQRMNQDPTSKLPKAYIMYHPLTGKCAQVNEKNELEIGSCGENKNRWIYDGSQILWNGTKKCLTASGEDLPVSVSDDCKSKNSSWKPVSLSRLHLATSHDQNGKQLCLHKDSNSSVVVTSKCICINDDSLCLDDPQSQWFQLVATNV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02718 530 Pfam Cellulase (glycosyl hydrolase family 5) 59 344 IPR001547 GO:0004553|GO:0071704
Car07g02718 530 SUPERFAMILY Ricin B-like lectins 396 505 IPR035992 -
Car07g02718 530 Gene3D Glycosidases 17 390 - -
Car07g02718 530 SUPERFAMILY (Trans)glycosidases 17 375 IPR017853 -
Car07g02718 530 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 1 530 - -
Car07g02718 530 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS HYDROLASE 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02718 Car-Chr7 52289930 52292175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02718 17 526 Glycoside Hydrolase AT1G13130 39.341 2.07e-135 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02718 K01179 - egr:104441706 587.415