Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02689 ATGGCCACGCCCACACCGGAAGCCGTCGCAACCTTCATGCGAATCACCGGAGCACCGGAGTTCGTTGCTCTCCAGAAATTAGAGGAATATGGCGGCAATCTCAACGAAGCCGTGAATGCACATTTTATCGAAGGACACATGCACATTCAGGACCAAAATCTTGCTGCTGCTGCAACCCCACAATATAGTTACTCCGAAGCAAATAATCAAAACAACCAAAACCGCGGTGGGTCGCGTGGAATTTGGCCTTTGTTCAATGCTGCTAGAAGGTTTAGACTTTCACTACTACTTGACTCAAATTATAGGAGAGAACTTAGAGATCTATGTAATGGGTTGGGTTCTACTACGTTTTCAAGTAGTGCACCACCACGTAGTTCCCCTCAAGGAGAGGCGGTGGAAGTTCCTACAGGTACCAATAGTGCACTTGTGTCACCTTATCAATCGGGATTGAGCTATGCAGGTGCAGATATTAATGGAAATTTATCATCTCACGGTCGAGGATATTATGGGGCAGATGATTATCAGAATAACTACCCTTTAGCTCAGTCAAATGCTTCACGTGTTCATGATCAAGATGCAGAGGAGGCAATGATTCAAGCTGCTATAGAAGCCTCAAAGAAGGAGAGCAGAGAAGGTTCTTCACGGAATGCTCCAAATCATTCATCTGATGAAGGGCTTCCTCAGAGTCATTTTAACCGAGAAGATGATGATGATTTAGCTCGTGTCATTTCATTGTCATTACAGACTGCAGAGCAAGAGGAGGCAATACGCGAGCGTCAAGTGAAAGAGGAAAAGGAAGTTCGTGATTTGTTAGCCGAGGGAGAGAAAACCAACTCTAGCAGAAGCAGATTAGAGTGGGGTGGTATTTCTTATGATGAGCTCAATGAAGCATTGCTGATTGAAACTGCACTTTTTGGTGAAACTCCCAATCAAAGTGCTCACAAATTTTCATCTTTGCCTGACCTGGAACGTCATTCAGATAAAAATGCGGATCCCAAGATGCAGTGTTCATCCAGTTCAGCATCTCAATTATTAGCTGAGACTCGGTTGCTAAGACAACAACAGGATGCTGACTATATAGCATCACTACTAGTTGATAAACAAAAAGAATTGAATTCTCTCAACAAAGCTGAAACCCATTCCTCAAAGGAAGAAGAATCACACAGACAGATGCTTGAAAGAACGGAATTGGAGAAAATACTTGATACAAAAAATATTATGCTTTCAAATGAACCACCGTTAGGTGATGAAAAAGCAATTACTATTGTTGTTCGAATGCCAGACGGTGGTCGTTGTGAACGTCGCTTCCTCAAAACTGACAAGCTTCAGCTTCTTTTTGATTTCATAGACATTTATGGAGCAGTGAAGCCTGGCACCTATCGAGTTGTAAAGTCATACCCGCGGCGAGCATACAGTATTAATGATAGCTCGGCTACTCTGACTGAAGTAGGCCTTAGCAACAAGAATGAGGCTTTATTTCTGGAGTTGATTTAG 1494 0.4304 MATPTPEAVATFMRITGAPEFVALQKLEEYGGNLNEAVNAHFIEGHMHIQDQNLAAAATPQYSYSEANNQNNQNRGGSRGIWPLFNAARRFRLSLLLDSNYRRELRDLCNGLGSTTFSSSAPPRSSPQGEAVEVPTGTNSALVSPYQSGLSYAGADINGNLSSHGRGYYGADDYQNNYPLAQSNASRVHDQDAEEAMIQAAIEASKKESREGSSRNAPNHSSDEGLPQSHFNREDDDDLARVISLSLQTAEQEEAIRERQVKEEKEVRDLLAEGEKTNSSRSRLEWGGISYDELNEALLIETALFGETPNQSAHKFSSLPDLERHSDKNADPKMQCSSSSASQLLAETRLLRQQQDADYIASLLVDKQKELNSLNKAETHSSKEEESHRQMLERTELEKILDTKNIMLSNEPPLGDEKAITIVVRMPDGGRCERRFLKTDKLQLLFDFIDIYGAVKPGTYRVVKSYPRRAYSINDSSATLTEVGLSNKNEALFLELI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02689 497 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 193 212 IPR003903 -
Car07g02689 497 SMART uim 193 212 IPR003903 -
Car07g02689 497 SMART uim 234 253 IPR003903 -
Car07g02689 497 PANTHER FAS-ASSOCIATED PROTEIN 1 260 - -
Car07g02689 497 PANTHER FAS-ASSOCIATED PROTEIN 280 497 - -
Car07g02689 497 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 280 497 - -
Car07g02689 497 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 1 260 - -
Car07g02689 497 Pfam UBA-like domain 7 45 - -
Car07g02689 497 SUPERFAMILY Ubiquitin-like 407 491 IPR029071 -
Car07g02689 497 MobiDBLite consensus disorder prediction 116 140 - -
Car07g02689 497 MobiDBLite consensus disorder prediction 252 281 - -
Car07g02689 497 MobiDBLite consensus disorder prediction 204 233 - -
Car07g02689 497 ProSiteProfiles UBX domain profile. 415 493 IPR001012 GO:0005515
Car07g02689 497 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 234 253 IPR003903 -
Car07g02689 497 CDD UBX 421 495 - -
Car07g02689 497 Pfam UBX domain 416 495 IPR001012 GO:0005515
Car07g02689 497 CDD UBA_Ubx1_like 6 42 - -
Car07g02689 497 SMART ubx_3 412 496 IPR001012 GO:0005515
Car07g02689 497 MobiDBLite consensus disorder prediction 252 280 - -
Car07g02689 497 Gene3D - 416 496 - -
Car07g02689 497 Pfam Ubiquitin interaction motif 194 209 IPR003903 -
Car07g02689 497 Pfam Ubiquitin interaction motif 234 250 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02689 Car-Chr7 51736869 51744069 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02689 - K18726 gmx:100795740 578.17