Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02232 ATGGCGAACAGGAACCTGGAAAAGATGGCATCAATTGATGCTCACCTTCGGCAATTGGTTCCTGCAAAAGTGAGTGAGGATGACAAACTTATTGAGTATGATGCTTTACTCTTGGATCGGTTCCTTGATATTCTACAGGATTTACATGGGGAGGATCTGAAAGAAACGGTCCAAGAAGTATATGAACTTTCTGCTGAGTATGAAGGAAAGCATGACCCTGAGAAACTGGAAGAACTTGGAAATCTGATAACTAGTTTGGATGCCGGAGATTCTATTGTTGTTGCCAAGTCCTTTTCCCACATGCTTAACTTGGCAAACTTAGCTGAAGAAGTCCAAATTGCTCATCGCAGAAGGATTAAGTTGAAAAAGGGTGATTTTGCTGATGAAAACAATGCAACAACTGAATCAGATATTGAAGAAACTCTCAAGAGACTTGTAGGGGATCTGAACAAGTCTCCTCAGGAAGTTTTTGATGCACTGAAAAACCAGACTGTTGATCTTGTTCTTACTGCTCATCCTACGCAATCAATCCGTAGATCTTTGCTTCAAAAGCATGGAAGGATACGGAATTGTTTAGCACATTTGTATGCTAAAGATATCACTCCTGATGATAAACAGGAGCTTGATGAGGCTCTACAGAGGGAGATCCAAGCTGCTTTCCGTACTGATGAAATAAGGAGGACCCCTCCTACACCACAAGATGAGATGAGAGCAGGGATGAGCTACTTCCATGAAACAATTTGGATGGGTGTACCTAAATTTCTCCGTCGTGTTGATACAGCTTTGAAAAATATAGGGATTAATGAACGTGTCCCATATAATGCGCCCCTTATTCAGTTTTCTTCTTGGATGGGTGGAGATCGTGATGGAAATCCAAGAGTTACTCCTGAAGTGACAAGAGATGTTTGCTTATTGGCTAGAATGATGGCTGCTAATTTGTATTATTCTCAGATAGAGGATCTTATGTTTGAACTGTCTATGTGGCGCTGCAATGACGAGCTACGTGTCCGTGCAGAAGAACTTAACAGGTCTTCCAAGAAAGACGCCGTTGCAAAACACTACATAGAATTTTGGAAAAACATCCCTCCAAATGAACCATATCGTGTGCTACTTGGTGAAGTAAGGGATAGGCTCTACCAAACTCGTGAACGTTCTCGCCATTTGTTAGCTAATGGGTACTCTGACATTCCAGAGGAGCATACTTTCACCAATGTTGACGAGTTCTTGGAACCTCTTGAACTCTGTTATAGATCACTTTGTGCTTGTGGTGATCGCGCAATTGCTGATGGAAGTCTTCTAGATTTCTTGAGGCAAGTCTCTACTTTTGGTCTGTCACTAGTGAGGCTTGATATCAGGCAAGAATCAGAACGTCATAGTGATGTATTGGATGCAATTACCAAACATCTGGAAATTGGCTCCTACCAAGAATGGTCTGAAGAAAAGCGGCAGCAATGGCTTTTGTCTGAATTGAGTGGCAAACGCCCCTTGTTCGGACCTGACCTTCCCCAAACTGAAGAAATTAGAGATGTTTTGGACACGTTTCATGTCATAGCAGAACTACCATCAGACAACTTTGGAGCATATATCATATCAATGGCTACTGCAGCATCCGATGTGCTTGCAGTTGAACTTCTACAACGCGAATGCCATGTCAAGCATCCATTGAGAGTTGTGCCATTGTTTGAGAAGCTTGCTGATCTGGAGGCAGCTCCTGCTGCATTAGCCCGGTTGTTCTCAATTGATTGGTACAGAAATCGGATCAACGGGAAACAAGAAGTCATGATTGGGTATTCTGATTCAGGTAAAGATGCTGGAAGGTTTTCTGCAGCATGGCAGCTATACAAGGCTCAAGAGGAGCTTATAAAGGTAGCTAAGGAATATGGTGTTAAACTAACTATGTTCCATGGTCGCGGAGGGACTGTTGGAAGGGGTGGTGGTCCCACTCACCTTGCTATACTGTCTCAGCCTCCAGAGACAATCCACGGATCACTTCGTGTAACTGTCCAAGGTGAAGTTATTGAGCAATCATTTGGAGAGCAGCACTTGTGTTTCAGAACACTACAACGTTTCACTGCAGCTACTCTAGAGCATGGAATGCATCCTCCAATTTCTCCCAAACCGGAATGGCGTGCTTTGATGGACCAGATGGCTGTCATTGCCACAGAAGAATACCGTGCTATGGTATTTCAAGAACCCCGTTTCGTTGAGTATTTCAGGCTGGCGACACCAGAGTTGGAATATGGTCGGATGAATATCGGAAGTCGACCAGCAAAGCGAAAGCCAAGTGGAGGTATTGAGACACTCCGTGCTATACCTTGGATCTTTGCCTGGACACAAACAAGGTTTCATCTTCCAGTGTGGCTTGGATTTGGGGCAGCATTCAAGCAAGTTATTGACAAGGATATTAGAAATCTTCAAATGCTACAAGAGATGTACAATCAATGGCCTTTCTTTAGGGTCACTATTGATTTAGTGGAAATGGTGTTTGCCAAGGGAGACCCCGGTATTGCTGCTCTTTATGACAGGCTCCTTGTTTCAAAAGATCTATGGCCTTTCGGCGAGCAGTTGAGGACCAAATTTGAAGAAACTAAGAAACTCCTACTTCAGGTGGCTGCGCACAAGGATCTTCTTGAGGGAGACCCTTACTTGAAGCAAAGACTCCGCTTGCGTGATTCGTACATTACTACCCTAAATGTGTGCCAAGCTTACACATTGAAACGTATCCGAGATCCAAACTATAATGTGAAGCTACGCCCTCACATCTCTAAAGAGTCTATAGAGATAAGTAAAGCTGCTGATGAACTTGTAACACTGAACCCAACAAGTGAGTATGCACCTGGTTTGGAAGATACTCTCATTCTCACCATGAAGGGTATTGCTGCTGGATTGCAAAACACTGGTTAA 2904 0.4353 MANRNLEKMASIDAHLRQLVPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEVYELSAEYEGKHDPEKLEELGNLITSLDAGDSIVVAKSFSHMLNLANLAEEVQIAHRRRIKLKKGDFADENNATTESDIEETLKRLVGDLNKSPQEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLAHLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWMGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRAEELNRSSKKDAVAKHYIEFWKNIPPNEPYRVLLGEVRDRLYQTRERSRHLLANGYSDIPEEHTFTNVDEFLEPLELCYRSLCACGDRAIADGSLLDFLRQVSTFGLSLVRLDIRQESERHSDVLDAITKHLEIGSYQEWSEEKRQQWLLSELSGKRPLFGPDLPQTEEIRDVLDTFHVIAELPSDNFGAYIISMATAASDVLAVELLQRECHVKHPLRVVPLFEKLADLEAAPAALARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRFSAAWQLYKAQEELIKVAKEYGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEQHLCFRTLQRFTAATLEHGMHPPISPKPEWRALMDQMAVIATEEYRAMVFQEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIETLRAIPWIFAWTQTRFHLPVWLGFGAAFKQVIDKDIRNLQMLQEMYNQWPFFRVTIDLVEMVFAKGDPGIAALYDRLLVSKDLWPFGEQLRTKFEETKKLLLQVAAHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYNVKLRPHISKESIEISKAADELVTLNPTSEYAPGLEDTLILTMKGIAAGLQNTG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02232 967 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 967 IPR022805 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 442 462 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 591 611 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 633 662 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 PRINTS Phosphoenolpyruvate carboxylase signature 765 791 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 593 605 IPR033129 -
Car07g02232 967 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 967 IPR015813 GO:0003824
Car07g02232 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 Pfam Phosphoenolpyruvate carboxylase 35 967 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car07g02232 967 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Car07g02232 967 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 967 - -
Car07g02232 967 Gene3D Phosphoenolpyruvate/pyruvate domain 308 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02232 Car-Chr7 32567495 32572952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02232 K01595 - gmx:100820574 1820.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02232 07 32567495 32572952 Car07g02232 07 32567495 32572952 ECH
Car01g01980 01 44911741 44916930 Car07g02232 07 32567495 32572952 PCT
Car07g02232 07 32567495 32572952 Car01g02458 01 50251953 50258389 PCT