Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02189 ATGAGCCGATCGATCGAGCAGCCGCCGCCTCCGCCGTCTCTGTCGGAACATTCATTTCAGAATTCCAACTCAAGGAGCGTGTGTTCTGGAAACAGTTCTCATCGTTTCATGGACCCTGAGGTAATCGAGATTCCACCACCACCGCCAACTCACAACTCTTCCAATTTGATGAAGCAGAAAGAGGCCATTTTACTGGATGTGATTGACATCGACGACGATGATGACTCAACAGATTTACTGGTAGTTAGCGAAGAAGTTGGTAGAAGTAATAAGGGGAAGACGATTGAATCTGTTCAAAATGGTTATAGTGATCATCAAACTATGGAACACTTTGATAATATATATTTTCCGCATGGGATTGACAAAGCTGGACCAAGTAGCAGGGTCGAATCTTCCAATGGTTATACTTCTGTTCCAAATAATTTAATCAACATTGATGAGCATGGTTCTGACCACTCATATGATGATGACGATGACGACTACCCTGATCTTTTTACGGATGATTATATGGATGTAGATAATTATGCTTTACTACAGGCACATTTTGATAATGCGGATATACCTCCTGGTATTGAGGCACCGATTCCTTGGTTAAAAGAATATGATCTAGTTTCAAAGAAGGCTGAAAGTAGTTTATTTTATCCTAGCTTTCATATTCAGCAATCTGAATCTCAAAATTCTCAAGTTAGTGGCTTATCTCAGCCTACATGGTCATTAGAGCCTATTATGCCTGAAGCCAAAGGACCTTTAGGAGGTAGTTGTAGTGAACAAAATAAAATGGAATGTACTGATCTCCCTCCCAAAGTAAAAATACCTTCTCAGTTATTTTCTCAAGCTGTCACTAGTAAGAAAAGAATAGAAGCCATACAGTGCAGGAGACGCAAGTTAAAGTTGGCATTAGGAGCAGAGTCATCTACCTCTAAATGGTTTTCGGGACCTTCTGGTAAAAAGAAGCTTTATGGTTTTGGTTCTTCAACTAACCATGGCGTTGTAGACGACTCAGAGGGAATGAAGTTTCCATATATAGGTGAGTCACAGCATAGCAAACTAATTGAAAGTGCAAAGAATGCAGCTGAAACTGGAAGTATCAGTTCACAACATTCAAATTTCATTGGACCTGTAGATGGATCATTTTTTTTTTCGGGAACTGAATTTGCAAATCCTTGGCTGGCTCAGTTTAATCATTTTCCAAATTATACAGCTAATTCAACTATTTTCAATCCATTTGTTCCTCCATTTGTTCCTCTTCATGCCCCACCTGAGCAAGTGTTCGGTAACACTTGGGTTCCCAATTCTGCGAGAGATGGAAATAATGGCACAACTGCTGATAGTACTGTTGTGACTATCTCTGATGAAGTCAGGGATGAAATTCTGAAGAAATTTCAAAACTTTAAGCAATTTGACACTATTGATGACACTTCAGACCATTACTTCACTCGCGCCAATGTGTCCATGACACAGCATTCAAAGAATTGGGTTAAAAGAATTCAGGAAGAGTGGAAGCTATTGGAGAAGGATTTACCAGATTCAATATTTGTCAGAGTTTATGAATCAAGAATTGATCTGTTGAGGGCTGTGATTATTGGAGCAGAGGGAACTCCTTATCATGATGGTCTTTTCTTTTTTGATGTTTTCTTTCCCCGGGACTATCCCAATGTACCTCCGCAAGTCTACTACCATTCTGGTGGACTTCGGCTCAATCCAAATTTATATAATTGTGGCAAAGTGTGCCTTAGTCTACTTAACACCTGGTCTGGCAATAAGAATGAGAAGTGGCTTCCAGGTACTTCAACAATTTTACAGGTCCTGGTCTCTATACAAGGTCTAATCTTGAATACAAAGCCATACTTTAATGAGCCTGGATATGCACGTTTGAGTGGTTCTGCTGAAGGTGAAATGAGATCCCTGCAGTATAATGAAGACACATTCCTCCTTTCATTGAGGACAATGGTGTATCTGATACGAAGACCTCCAAAGAGTTTCGAGGACTACGTAAAGGGGCATTTCTGCAGCCGAGCTCAGGATATTTTGGTGGCTTGTAAAGCATACATGGATGGTGCTCAAGTTGGTTGTTTGGTCAAAGGTGGGGTTCAGGATGTTGATCAGGGTGACAAGAGCTGCTCAAAGGAGTTTAAAAATTCTTTAACTGCATACGTGGATATGCTTATAAAAGAGTTTACACAAGTTGGAGCCAAGGATTGTGAGAAATTCTTGTCTTCATCAACAGTAGTCAACAAGCCAACGGAATAG 2250 0.4031 MSRSIEQPPPPPSLSEHSFQNSNSRSVCSGNSSHRFMDPEVIEIPPPPPTHNSSNLMKQKEAILLDVIDIDDDDDSTDLLVVSEEVGRSNKGKTIESVQNGYSDHQTMEHFDNIYFPHGIDKAGPSSRVESSNGYTSVPNNLINIDEHGSDHSYDDDDDDYPDLFTDDYMDVDNYALLQAHFDNADIPPGIEAPIPWLKEYDLVSKKAESSLFYPSFHIQQSESQNSQVSGLSQPTWSLEPIMPEAKGPLGGSCSEQNKMECTDLPPKVKIPSQLFSQAVTSKKRIEAIQCRRRKLKLALGAESSTSKWFSGPSGKKKLYGFGSSTNHGVVDDSEGMKFPYIGESQHSKLIESAKNAAETGSISSQHSNFIGPVDGSFFFSGTEFANPWLAQFNHFPNYTANSTIFNPFVPPFVPLHAPPEQVFGNTWVPNSARDGNNGTTADSTVVTISDEVRDEILKKFQNFKQFDTIDDTSDHYFTRANVSMTQHSKNWVKRIQEEWKLLEKDLPDSIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPRDYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGNKNEKWLPGTSTILQVLVSIQGLILNTKPYFNEPGYARLSGSAEGEMRSLQYNEDTFLLSLRTMVYLIRRPPKSFEDYVKGHFCSRAQDILVACKAYMDGAQVGCLVKGGVQDVDQGDKSCSKEFKNSLTAYVDMLIKEFTQVGAKDCEKFLSSSTVVNKPTE 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02189 749 SUPERFAMILY UBC-like 481 658 IPR016135 -
Car07g02189 749 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 52 741 - -
Car07g02189 749 MobiDBLite consensus disorder prediction 1 15 - -
Car07g02189 749 Pfam Ubiquitin-conjugating enzyme 495 615 IPR000608 -
Car07g02189 749 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 491 651 IPR000608 -
Car07g02189 749 MobiDBLite consensus disorder prediction 16 33 - -
Car07g02189 749 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 52 741 - -
Car07g02189 749 SMART ubc_7 494 651 - -
Car07g02189 749 MobiDBLite consensus disorder prediction 1 54 - -
Car07g02189 749 CDD UBCc 493 620 IPR000608 -
Car07g02189 749 Gene3D Ubiquitin Conjugating Enzyme 450 732 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02189 Car-Chr7 30689352 30699142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02189 441 734 Miscellaneous Gene Families AT2G33770 49.662 2.91e-87 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02189 K10581 - ccaj:109805727 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02189 07 30689352 30699142 Car07g02189 07 30689352 30699142 ECH