Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02178 ATGGCCACCCTCCTCGAATCCATCTCCGTCGTCCCTCGCCCTTCTGCCGCTATCTCTCCCGTTGTCGCTCGCCGGAGTTCCCTCAAGTTCGCAACTTACGTGGGCCTCAGGCCTAGGCCCAGGCCCAGACACATTTTCTCCACTCACTGCGCTACTTCCAGAATCGCTAGCCGTAACTCACGCGTACTGTGCGAGGCTCAGGATACCGCTGTTGATGTGGCTGCTATTACCGATGAAAATTGGCAATCGCTTGTTCTTGAATCCGAATCTCCCGTTTTGGTTGAATTCTGGGCTTCATGGTGTGGTCCCTGCAGAATGATTCACCCTATAATTGATGAACTAGCCAAGCAATATGCTGGAAAACTCAAGTGTTACAAACTCAATACTGATGAGAGCCCTTCAACTGCTACCCGGTATGGTATTCGAAGTATCCCAACTGTTATGATCTTCAAAAATGGTGAGAAAAAAGACACAGTTATTGGAGCTGTGCCCAAATCAACACTGACATCAAGCATAGAAAAATTCTTATAA 531 0.4821 MATLLESISVVPRPSAAISPVVARRSSLKFATYVGLRPRPRPRHIFSTHCATSRIASRNSRVLCEAQDTAVDVAAITDENWQSLVLESESPVLVEFWASWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTSSIEKFL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02178 176 CDD TRX_family 79 173 - -
Car07g02178 176 ProSiteProfiles Thioredoxin domain profile. 64 176 IPR013766 -
Car07g02178 176 Pfam Thioredoxin 73 173 IPR013766 -
Car07g02178 176 ProSitePatterns Thioredoxin family active site. 93 111 IPR017937 -
Car07g02178 176 PRINTS Thioredoxin family signature 92 100 - -
Car07g02178 176 PRINTS Thioredoxin family signature 100 109 - -
Car07g02178 176 PRINTS Thioredoxin family signature 140 151 - -
Car07g02178 176 Gene3D Glutaredoxin 72 176 - -
Car07g02178 176 PANTHER THIOREDOXIN M-TYPE PROTEIN 2 176 - -
Car07g02178 176 TIGRFAM thioredoxin: thioredoxin 77 175 IPR005746 GO:0015035
Car07g02178 176 PANTHER GEO12009P1 2 176 - -
Car07g02178 176 SUPERFAMILY Thioredoxin-like 68 176 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02178 Car-Chr7 30205582 30208310 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02178 K03671 - gmx:100818054 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02178 07 30205582 30208310 Car07g02178 07 30205582 30208310 ECH