Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02172 ATGAGGGGTCCTTTAGGTGCAGTAATAGGAAGTTATACATCAAGTGATGGAGTTACTCAAATGGGTGGAATCATAAAGCACAACAGAAAATGCAGAGACATCACTGCTCTTTTGATCTTTATTGCTTTTTGGATTGCAATGATTGTTAATTCAAGTTTTGGTTTCAACCAAGGAAACCCACTCAGGCTTATTTACGGGATAGACTACAAAGGGAATGTGTGTGGGGACAAGCATGCACATCCTGGCCTTGGTGAATTGGAGCTCAGATATTGGCAAAATCCTAACCAAGTTTATCAGAGTGGATTGAAGGACAGCCAATTCAAACTTGCTGATGCGCGCAGTATATGCTTGTCGGGTTGCCCTATACCTTCTGACGATTCTCTTGATTGGGTGTGTGATTATCCTGAAGGAGACATTCGTCTTTCGATGGAAGATTGGGTTGGTAGGAACTACAATTATTATGAGTTCCTTACACAAGAAATGAGAAACTCCTCTCTACAACTTCAGGGCCCGTGTTATCCTGTTATATTTCCTAGCATAAATGTTTACTGGAGTTGCCAGTTTATTGCTCGAGCATCAAACACATCTTTGAAGCATTGGCAGGAGATGGGTGGTGTTAACATTGATGAAGACATTGTTATTGATAAGTCAATTCACAAATCTATTAATTCTCGGTCAGCTGTCTTAAAGAGGTACATGGCTGACATAGGAAAGGCATGGCCGGTGCTGATTGTTTGTGGAGGGATTTTACCTCTTTTTCTGTCTGTGATTTGGCTGATGATGATTCGGCATTTTGTTGCTGCAATGCCGTGGATAACAGTGGTTCTCTTTAATGTTCTAGTAATAGCAGTCACAATGTTGTTCTACATTAAAGCTGGATGGATTGGAAATGATGCTATCTCTCCCATCATTGGTGAGCATGACCCTTACATTAACGTATTTGGGAGGGAGTTGACTCATCTACGTGCTTTCACTGTACTTATGACTGTTATCATGGTTGTTTCGGTTCTTACTTCAATTGCTATCGTTCGACGAATCCTTATGGCAACATCTGTCCTAAAGGTAGCTGCAAAAGTGATTGGAGAAGTTCAAGCACTCATAATTTTTCCACTCGTCCCGTACGGTATCCTTGCCGTGTTTTACATGTTTTGGACTTCAGCTGCTCTCCATTTATTCAGCTCTGGCCAGATTGCTCAGAACGACTGCAACTCTAACTGCTGCACGTATGACCTTGTTGCAAAACGCGTGAACTGTGATCGTTGTTGTGGATATAGCATTCATTACACACCACATATTGGAATTTCCATTCTTTTTCACCTATTTGGGTGCTATTGGGCTACACAATTTTTTGTTGCGTGCTCCTCAACGGTGGTTGCCGGGTCTGTTGCCTCTTATTATTGGGCTCATGGTGAAACATCTCCTGAAATTCCATTTTTGTCAGTCTTTTCCTCCATGAAGAGGCTTATGCGTTACAGTCTCGGATCTGTGGCTCTGGGTTCTCTGATTGTGTCATTTGTAGAATCAATCCGCTTTCTGCTTGAATCTATTCGTCGCAAACTAAAAGTATCTAGTCACGCGCATGACAGCTGGATAGGCAAGGCTGCATACCAATCTTCCCAATGTTTTCTCAGGTGTATTGAGTGGACAATCAAATCTGTAAACCGAAATGCTTACATAATGATTGCTATAACTGGCAAAGGTTTCTTTAGCGCGTCTTCTATTGCAACAGATTTGATCATGAATAACATTCTAAAGATTGGGCGTCTTAATATAATTGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCAAGTTCGGTGTTCGCATTCCTCATGTTGGACACACACAAGTACAATTCTGGCCATAACAAGACCTCATCTCCACTCTTCCCTGTTGTGGTATGCTGGGGTCTTGGATACACTGTTGCAACTCTATTTTTTGCAGTGGTGGAGATGTCAATTGATAGCATTGTTCTCTCATTCTGCCAGGATTCTGAAGAACACCAAGGGACAGCACAGTATGCTCCACCCCTTCTCATTGATACTCTTGGTAACCAAAATGAGATGCACAGACTTACTCAGGGACAACAATGA 2103 0.4199 MRGPLGAVIGSYTSSDGVTQMGGIIKHNRKCRDITALLIFIAFWIAMIVNSSFGFNQGNPLRLIYGIDYKGNVCGDKHAHPGLGELELRYWQNPNQVYQSGLKDSQFKLADARSICLSGCPIPSDDSLDWVCDYPEGDIRLSMEDWVGRNYNYYEFLTQEMRNSSLQLQGPCYPVIFPSINVYWSCQFIARASNTSLKHWQEMGGVNIDEDIVIDKSIHKSINSRSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLVIAVTMLFYIKAGWIGNDAISPIIGEHDPYINVFGRELTHLRAFTVLMTVIMVVSVLTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLVPYGILAVFYMFWTSAALHLFSSGQIAQNDCNSNCCTYDLVAKRVNCDRCCGYSIHYTPHIGISILFHLFGCYWATQFFVACSSTVVAGSVASYYWAHGETSPEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLESIRRKLKVSSHAHDSWIGKAAYQSSQCFLRCIEWTIKSVNRNAYIMIAITGKGFFSASSIATDLIMNNILKIGRLNIIGDVILFLGKLCVSLSSSVFAFLMLDTHKYNSGHNKTSSPLFPVVVCWGLGYTVATLFFAVVEMSIDSIVLSFCQDSEEHQGTAQYAPPLLIDTLGNQNEMHRLTQGQQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02172 700 Pfam Plasma-membrane choline transporter 327 669 IPR007603 GO:0022857|GO:0055085
Car07g02172 700 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 698 - -
Car07g02172 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 698 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02172 Car-Chr7 29971088 29978056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02172 K15377 - gmx:100815939 1305.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02172 07 29971088 29978056 Car07g02172 07 29971088 29978056 ECH