Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02162 ATGGCGTACCCTCTCTCTTCCTCCTTCAATGTTCCCATCACCCGCCACACCTCTCCATCGTTCTTCCATCGCGCCACGTCACCTTCTCGAATCTTCTGCTACTCAAAGAACCACTACCTCACCAACAAGGAACAATGTGATGACACGTCAGCGGGTATATGTGAGAGGATAATGAAGAAGTTGAAGAGTGTGATTCCTATTGTAATTGCTTCCACTGTTCAGTTGGGTTTACTGTTTCCGTTGGTTGATTCGGTTCCGTACGTTTCTTCTCCTGCTGCGATGGCGATTCTTTATTCGCCAGATACGAAGGTTCCTAGAACTGGTGAAGTTGCTCTTAGGAAAGCTATTCCTGCAAACGCTGACATGAAAGCTATACAGGAATCTCTTGAAGATATTTCGTATTTGTTGAGGATTCCACAGAGGAAACCTTATGGAACAATGGAGGGGAATGTGAAAAAAGTTTTGAAGATAGCGGTAGATGAAAAGGATTCTATACTGGCAAGTATACCAGCTGAACTGAAGGAAAAGGGCTCTCTGGTGCATACCTCTCTAATAAATGGAAAGGGGGGTTTGCAAGCTCTCCTTCAATCTATAAGGGAACAGGATGTGGATAGAGTATCTGTAAGCCTTCAATCTACACTGGATACCGTGGCAGAGCTAGAGTTATTACAGGCACCAGGACTATCTTTTCTATTGCCAGGGCAATACCTGCAATATCCACGACTTTCAGGTAGAGGAACTGTTGAGTTTGTCATTGAGAAAGGAGATGGTTCAAAATTTACTCCAGTTGGTGGAGAAGAGAGAAAAACTGCCACCATTCAGGTTGTTATAGATGGATTTTCAGCTCCATTAACTGCGGGGAATTTTGCAAAACTGGTGATGGATGGAGCATATAATGGCATAAAGCTCAGCTGTTCCAATCAAGCTATTCTGTCGGAAAATGGACAAGATAAGAGCAGTGGTTACAGTGTTCCCTTGGAAATAATGCCCTCTGGACAATTTGAGCCGCTGTATAAAACAACATTAAGTGTACAGGATGGAGAACTGCCAGTTCTGCCTTTATCTGTTTATGGAGCGGTTGCTATGGCTCATAACGAAGTCTCCGAGGAGTATTCATCACCTTATCAGTTTTTCTTCTATCTCTATGATAAACGAAGTGCTGGCTTGGGAGGGATATCATTTGATGAAGGGCAATTTTCAGTTTTTGGGTAA 1212 0.4332 MAYPLSSSFNVPITRHTSPSFFHRATSPSRIFCYSKNHYLTNKEQCDDTSAGICERIMKKLKSVIPIVIASTVQLGLLFPLVDSVPYVSSPAAMAILYSPDTKVPRTGEVALRKAIPANADMKAIQESLEDISYLLRIPQRKPYGTMEGNVKKVLKIAVDEKDSILASIPAELKEKGSLVHTSLINGKGGLQALLQSIREQDVDRVSVSLQSTLDTVAELELLQAPGLSFLLPGQYLQYPRLSGRGTVEFVIEKGDGSKFTPVGGEERKTATIQVVIDGFSAPLTAGNFAKLVMDGAYNGIKLSCSNQAILSENGQDKSSGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEVSEEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02162 403 SUPERFAMILY Cyclophilin-like 272 403 IPR029000 -
Car07g02162 403 Gene3D - 118 223 IPR023222 -
Car07g02162 403 Gene3D - 265 403 IPR029000 -
Car07g02162 403 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 39 403 IPR044259 -
Car07g02162 403 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 260 403 IPR002130 GO:0000413|GO:0003755
Car07g02162 403 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 272 385 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02162 Car-Chr7 29482243 29495564 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02162 - - aip:107630088 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02162 07 29482243 29495564 Car07g02162 07 29482243 29495564 ECH