Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02157 ATGGCTTCAGATGGATCTGTTCAAAGGCGTATTTCGCTGAGAAAGAAAGTGAATTTGCGTAGTTACGACGAGGGTTTGATGAATGATGAGCTTTATGACAAGAAGTTGGAGGATAGTTTGAAGAAGAAAAGTAAGACTCCTGAAGATTTGGAGAAAGAGACTCGAACCGAGTCTATGATTGCCTTTTCGCTTGGTTTTCCAATTGATGCTTTGCTTGAACAAGAGATTCGAGCTGGTGTTGTGAGTGAATTGGGTGGAAAAGAGCAGAATGATTATCTTGTTGTAAGGAATCATATATTGGCTCTTTGGAGAGGGAATGTTAGGATGTGGTTGACAAAGGGACAGATTCGAGAAACTGTTAGCAATGAGTTTGAACATTTGATTAATTCTGCTTATGAGTTTCTTTTGTATAATGGGTACATTAACTTTGGGGTTTCACCGTCGTTTACTTCTCAGTTGCCTGAGGCGACGGAAGGGACTGTGGTTGTTATTGGTGCTGGCCTTGCTGGCTTGGCTGCAGCGAGGCAGCTTTTGTCGTTTGGTTATAAGGTTGTGGTTTTGGAAGGTAGGAACCGTCCTGGTGGTAGGGTTTATACTCAGAAGATGGGGCATGAGGGAATATTTGCGGCCATGGATCTTGGTGGGAGTGTTATTACTGGAATTCATGCTAATCCTTTGGGGGTTTTGGCACGACAGCTTTCAATTCCACTTCATAAAGTGAGAGTTAATTGCCCTTTGTACAAGCCGAATGGGGAACCGGTTGATAAGGAAATAGATTCAAGTATTGAAATTGTATTCAATAAGTTGCTTGACAAAGTTATGGAGCTGAGGCAAATTATGGGAGGGTTTAAGAGTGATACCTCACTTGGTTCGGTCTTGGAGACACTCAAATGTTTATATGCTGTGGCTCAGAGTACTGATGAGAGGCAATTGCTTGATTGGCATCTTGCGAATTTAGAATATGCAAATGCTGGATGTCTTTCAAATCTTTCGGCTGCCTATTGGGATCAGGATGATCCTTATGAAATGGGTGGTGATCATTGTTTTCTTGCTGGAGGCAATTGGAGATTGATCAAAGGTTTATGTGAAGGAGTTCCGATTTTTTATGGAAAGACAGTCAACACTATCAGATATGGAAATGAGGGTGTTGAGGTTATTGCTGGGGATCAAATCTTTCAAGCAGATTTCGCCTTATGCACTGTGCCTCTTGGAGTTCTCAAAAAGAAGGCCATTAGTTTTGAACCTGAGTTACCTGCAAGAAAGCTTGAATCGATTGAGAGGCTGGGTTTTGGGCTTCTCAACAAAGTTGCTATGGTTTTTCCACATGTGTTTTGGGGGGAAGATCTCGACACATTTGGATGTCTCAATGAAAATAGTCATGAACGTGGGGAGTTCTTTTTATTTTACGCTTACCACACTGTTTCTGGGGGCCCTGCACTTATTGCGCTTGTGGCTGGTGAAGCTGCACAAACCTTTGAAAGTACAGATCCATCCATCTTGCTTCATCGGGTTTTGACCACTCTAAAAGGTATTTTTCAACCTAAAGGCATCACTGTGCCTGATCCAATACAGACAATTTGTACCAGATGGGGCAGCGATCCCCTTTCTTATGGTTCATACTCTCATGTTAGTGTGCAATCATCTGGTAGGGATTATGATATACTTGCAGAAAATGTGGGGAACCGACTGTTCTTTGCAGGTGAGGCCACTTGTAGGCAATATCCAGCCACTATGCATGGTGCTTTCATGAGTGGCTTGAGAGAAGCTTCGTGCATATACCAGTTAACCCGTGTTCCGCAAAATTATCCTAAGAAGTCCCTGCCTAAGAATATAGGACAAGTCAATGCTACCCTGGTTAATTTGTTCAAGATGCCTGATTTGGAATTCGGGAGATTTGCTTTCATATTTGATCTGTGGTCGGAAGATCCGGAGTCAAGGGGGATTCTGCAAATTACTTTTGGTGGTACTGAAGAAATTTACAAGGAGCTATTATACTGCTATCCAGACACCACAAGGTTTCCTTTGCAGCTTTACACTATTATATCCCGCGGACAGGCGCATCAAATGCAGGAAATTACAGGAGGAGATGAAAATAGGTTGTCGTTTTTGACAAAAAGCCTCGGATTGAAGCTTATGGGTTCAACTGCTTTACTAATTGATGGCAACTCTGTAATAGCTACCATTGCTGGCTCACGAAAAGGCAAAAGGAATCGCTCTGCACAACGCTGTAATCCAAAGAAGAGTCCATAA 2250 0.4253 MASDGSVQRRISLRKKVNLRSYDEGLMNDELYDKKLEDSLKKKSKTPEDLEKETRTESMIAFSLGFPIDALLEQEIRAGVVSELGGKEQNDYLVVRNHILALWRGNVRMWLTKGQIRETVSNEFEHLINSAYEFLLYNGYINFGVSPSFTSQLPEATEGTVVVIGAGLAGLAAARQLLSFGYKVVVLEGRNRPGGRVYTQKMGHEGIFAAMDLGGSVITGIHANPLGVLARQLSIPLHKVRVNCPLYKPNGEPVDKEIDSSIEIVFNKLLDKVMELRQIMGGFKSDTSLGSVLETLKCLYAVAQSTDERQLLDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCFLAGGNWRLIKGLCEGVPIFYGKTVNTIRYGNEGVEVIAGDQIFQADFALCTVPLGVLKKKAISFEPELPARKLESIERLGFGLLNKVAMVFPHVFWGEDLDTFGCLNENSHERGEFFLFYAYHTVSGGPALIALVAGEAAQTFESTDPSILLHRVLTTLKGIFQPKGITVPDPIQTICTRWGSDPLSYGSYSHVSVQSSGRDYDILAENVGNRLFFAGEATCRQYPATMHGAFMSGLREASCIYQLTRVPQNYPKKSLPKNIGQVNATLVNLFKMPDLEFGRFAFIFDLWSEDPESRGILQITFGGTEEIYKELLYCYPDTTRFPLQLYTIISRGQAHQMQEITGGDENRLSFLTKSLGLKLMGSTALLIDGNSVIATIAGSRKGKRNRSAQRCNPKKSP 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02157 749 Pfam SWIRM domain 72 143 IPR007526 GO:0005515
Car07g02157 749 SUPERFAMILY FAD/NAD(P)-binding domain 159 594 IPR036188 -
Car07g02157 749 Gene3D - 57 154 IPR036388 -
Car07g02157 749 SUPERFAMILY FAD-linked reductases, C-terminal domain 429 542 - -
Car07g02157 749 Gene3D - 161 590 IPR036188 -
Car07g02157 749 Gene3D - 242 548 - -
Car07g02157 749 ProSiteProfiles SWIRM domain profile. 51 152 IPR007526 GO:0005515
Car07g02157 749 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 36 735 - -
Car07g02157 749 PANTHER FLAVIN MONOAMINE OXIDASE 36 735 - -
Car07g02157 749 Pfam Flavin containing amine oxidoreductase 168 592 IPR002937 GO:0016491
Car07g02157 749 SUPERFAMILY Homeodomain-like 53 153 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02157 Car-Chr7 29179215 29182935 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Car07g02157 Amino_oxidase 5e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02157 - - mtr:MTR_8g464450 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02157 07 29179215 29182935 Car07g02157 07 29179215 29182935 ECH