Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02100 ATGTTGGAGGGTCGTTCCTGTGTGGTTCCGAGGTTGTTTTCGAGTTCTTGTCAGGCAGAGAACAATTGGTCTTTCATGAATTACATGCCGGATTTGGACATAAAAAATGGAAAGCGCCCTTTAGGTATCGATGACGAAGATGAACCGCAGTCAAGGAAGGTTAACAGGAGATTGGGTTCTTGTTATCAAGATGAGATGGGTCTTGTTTCGATTGAACAGAAATCTTGTCATGCTGACGATTCTGTTGTTCCACAAATGGATCTGGATGATCAGATGAAGGATTTTGAGTCATTGAATGATTGCCAAAGTGTTGAAAAGGTTGGTGCTTTTTCTGTCCAGTTTTCGGCTGAACTATTGCTGGATTCATCGTCCAAGTTCGGTGATTCATCAGATTCTGGTGTTCATCAATCTGATGAACATAAGAAGCAGCAGCTTGAAGGGAATTTGATGAATTCTAATGACGAGCCGTTGGATGAGCAGAAGGAGAGTCGTGCTGGTGATTCATCGGATTCCAGTTCACTTTTGCCGCGGATGAATCGGGACAGCTCAATTACCTGTTTAAGCCGCTGTTCGAGATCTGATTACGGGTCTCTTGCCTCGCTGAATAGGAGCTTTCGCAACATAATTCGGAGCGGTGAGCTGTATGCATGGAGGAGACTTAACGGTATCATTGAGCACTGGATTTATTTCTCATGTGCCCTCCTTGAATGGGAGGCCTATGATCCAATTCGTGAGCGGTGGATGCATTTACCTAGAATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAGTCTTTAGCTGTAGGTACCGAACTTCTTGTGTTTGGGAGGGAGCTTCGGTCCCATGTCATATATAGATATAGTCTTTTGACAAACTCGTGGGAGTCTGGTATGAGGATGAATGCTCCAAGATGCTTGTTCGGATCTGCTAGCCTCGGTGAGATTGCAATTCTAGCCGGCGGCTGCGATTCAGACGGACATATCCTCAACTCGGCCGAACTGTATAATTCCGAGAATCAAACATGGGAAATACTCCCAAGCATGAACAAGCCGAGGAAAATGTGTTCTGGTGTATTTATGGATGGAAAGTTTTATGTTATCGGGGGAATTGGAGGACGTGATTCCAAGCTTCTTACGTGCGGTGAGGAGTACAATTTACAAACTAGAACATGGACAGAAATTCCTAACATGTCGCCCGGCCGTAGTGCTCGAGGATCCGAGATGCCTGCTACAGCAGAGGCACCGCCTCTAGTTGCCGTTGTAAATAATGAATTATACGCTGCTGATTATGCTGACATGGAAGTTAAAAAGTACGATAAAGATAGAAAATTGTGGTTAACCATCGGGAGATTACCAGAGCGAGCGGCGTCAATGAACGGTTGGGGTCTTGCATTTAGAGCATGTGGAAATCGGCTTATTGTTATCGGTGGACCGAGGAGTCATGGTGAGGGTTTTATTGAACTCAATTCATGGGTTCCTAGTGAAGGACCTCCACAATGGAATCTTCTTGCAAGAAAACAATCTGGTAACTTTGTTTATAATTGTGCTGTGATGGGATGCTGA 1566 0.447 MLEGRSCVVPRLFSSSCQAENNWSFMNYMPDLDIKNGKRPLGIDDEDEPQSRKVNRRLGSCYQDEMGLVSIEQKSCHADDSVVPQMDLDDQMKDFESLNDCQSVEKVGAFSVQFSAELLLDSSSKFGDSSDSGVHQSDEHKKQQLEGNLMNSNDEPLDEQKESRAGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNRSFRNIIRSGELYAWRRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWESGMRMNAPRCLFGSASLGEIAILAGGCDSDGHILNSAELYNSENQTWEILPSMNKPRKMCSGVFMDGKFYVIGGIGGRDSKLLTCGEEYNLQTRTWTEIPNMSPGRSARGSEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKDRKLWLTIGRLPERAASMNGWGLAFRACGNRLIVIGGPRSHGEGFIELNSWVPSEGPPQWNLLARKQSGNFVYNCAVMGC 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02100 521 Pfam Kelch motif 352 399 IPR006652 GO:0005515
Car07g02100 521 Pfam Kelch motif 304 350 IPR006652 GO:0005515
Car07g02100 521 MobiDBLite consensus disorder prediction 127 177 - -
Car07g02100 521 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 521 - -
Car07g02100 521 SUPERFAMILY Kelch motif 234 518 IPR015915 GO:0005515
Car07g02100 521 SMART kelc_smart 364 412 IPR006652 GO:0005515
Car07g02100 521 SMART kelc_smart 316 363 IPR006652 GO:0005515
Car07g02100 521 SMART kelc_smart 272 315 IPR006652 GO:0005515
Car07g02100 521 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 521 - -
Car07g02100 521 Gene3D - 231 511 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02100 Car-Chr7 26358625 26361710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02100 181 397 EF-hand Containing Proteins AT4G39560 26.267 5.98e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02100 - - gmx:100791897 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02100 07 26358625 26361710 Car07g02100 07 26358625 26361710 ECH