Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02077 ATGGTGAAGGGTCCAGGTCTCTACTCCGATATCGGCAAAAGAGCTCGAGATCTTCTGTTCAAAGATTATCAGAATGACCACAAGTTCACTGTCACAACTCAAACTTTATCTGGAGTGGAAATCACTTCAAGTGGAGTCAGGAAGGGTGAGATATTTTTGGCTGATGTCAGCACTAAGGTGAAGAACAAGAACATCACCACCGATATCAAAGTAGACACGAACTCAAATCTACTCACAACAATTACTGTGGATGAACCTGCACCCGGACTCAAGACAATTTTTAGCTTCATTTTTCCAGATCAAAATTCTGCCAAGGTGGAACTACAGTACCAGCATGAGTATGTTGGGATCAATACTAGTATTGGGTTGACAGCAAGTCCCATTGTTAATTTCTCTAGCGTGATTGGAAATAATTTGGTTTCCGTCGGTTCAGATGTTTCCTTTGATACTGCCTCTGGCAACTTTATCAAATACAATGCAGGGTTGAATGTTACTCATGCTGACCTTATTGCATCTCTAACTATCAATGATAAAGGTGACACCCTTAATGCTTCGTATTACCATGTTGTAAGCCCACTGACTAACACTGCTGTTGGGGCGGAGCTTTCACGTAGCTTTTCCAGCAACGAGAATTTACTCACTATCGGCACACAACATGCTCTTGACCCCATAACCTTGTTGAAAGCTCGGGTGAACAATTACGGAAGGGCAAGTGCTCTGATCCAGCATGACTGGAATCCAAGAACACGTATCTCTCTCGTTGGGGAAGTTGATACCGTGGCCATTCAAAAGAGTGCAAAGGTTGGTCTTGCGTTGGCCTTGAAGCCTTAA 831 0.4332 MVKGPGLYSDIGKRARDLLFKDYQNDHKFTVTTQTLSGVEITSSGVRKGEIFLADVSTKVKNKNITTDIKVDTNSNLLTTITVDEPAPGLKTIFSFIFPDQNSAKVELQYQHEYVGINTSIGLTASPIVNFSSVIGNNLVSVGSDVSFDTASGNFIKYNAGLNVTHADLIASLTINDKGDTLNASYYHVVSPLTNTAVGAELSRSFSSNENLLTIGTQHALDPITLLKARVNNYGRASALIQHDWNPRTRISLVGEVDTVAIQKSAKVGLALALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02077 276 Gene3D Porin 1 275 IPR023614 -
Car07g02077 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Car07g02077 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
Car07g02077 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Car07g02077 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Car07g02077 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02077 Car-Chr7 25414435 25417202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02077 K15040 - gmx:100787662 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02077 07 25414435 25417202 Car07g02077 07 25414435 25417202 ECH
Car07g02077 07 25414435 25417202 Car07g00973 07 8571078 8573389 ECH