Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02054 ATGGATTATCAGCTTCTAAAGTTTGTTGCAATGTTGATAATGACAGCATTTGGAGACACAAGTTTAACCATAGAAGCCTGCAGTCCTAATGACATTAAAGCTTTGATGAGTTTCAAGAATGGAATCCAAATCGACACATCGGGTCGTCTCAAAAAATGGGTTGGTCTCAACTGCTGCAAATGGGAAGGCATTGTCTGTAAAAATTTAACCATTAGAGTGAAAGAGATTAATCTACCAGGATTCATTTCCAAAGATGGAGATTTATTTCAAACACAAATGACAGGGTTGATTTCACCTTCAATAGTACTTCTTACATCACTTGAAGTCATTGATCTTGGTGGTTTAGTTGGTCTTAGTGGAATAATTCCACTAACCATTGGTCTGCATTTAACAAATCTTCAAAAGCTTTACCTTTATGGAAATAATTTAACTGGTTCAATACCAGAAAACATTGGTGACTTGCAAAATCTCCAAGAACTTGCTCTTCAAGAAAATAAGCTATCTGGGTCTATTCCTTTGAGCATTGGAAGACTAAAAAACCTCAAAAGGTTGTTGCTTTATTCAAATCAATTTTCAGGTATAATACCATACTCACTTGGAAATTTGAGAAATTTGGTTGAGTTGGATTTTCATGACAATGCTTTAACCGGTAATATACCAGATGAAATCGGTAAATTGCAGGCTCTGGAAAATCTTGATCTTTCAAACAATTTGTTAAGTGGAAATTTACCTTCCTCGCTAACTAATTTAACTGTCATTTCGGTTATGTACCTAGACACCAATTATCTCGAGGGAACCATTTTGTTTCCCTCGAGACCAGGCGAAATGTCTAGTTTAGCCTTCTTAAGACTTCATAACAATCACCTTGATGGAAAAATACCTTCCAATTTTGGCTATTTAGTATCTCTTCAAAGAGTTTCTTTATCAAACAACAAACTAGAAGGAACATTACCATCTAGTATAGGAAATTTGATATCATTAACTGAGTTTTATATCAGTGAGAATTTTTTCTCTGGCTTAATACCAAAATCAATAGGCCAAATTTCTCAGCTCATAATGTTGAACATCTCTAGAAACTTTATTGAAGGGCCATTGCCTCAAGAGATTTCTTCCCTTCAAAATCTTCAAACACTAGATCTTTCTTTCAATCATTTGAATCTCTCTTATATCCCAAAATGGATAGCAAATATGTCGTCGCTTTCGCGCATTTACTTTGCAGGTTGTGGAATCCACGGTCAAATTCCAGACCTTTTACAAACAACTATTAGTCCAATCCAGGAACTAGATTTGTCAATGAACCTTTTCAATGGAATCATTCCATCATGGATTGGAAACCTCAATCAACTTTACATGTTAAATCTCTCAAAAAATTATATTCATTCACATATTCCTCATTCTTTTAGAAATTTGCATGATTTGGCTATTCTTGATCTTCATTCAAATAAACTAACAGGATCCATATCTCCGATTTTCGACATCGAACAACAAGGTATTTTTGGAGGATCACTAAGATTTGTTGATCTTTCTGATAACAAATTCTCAAGTGGAATTGAGAAAATTGGTGTAGGAGAACAATGTGATATTCAGTTTCTGAATTTGTCTCATAACATTCTAAAAGGTGTGTTACCAAATGCTGTTGGGAGAATGAGTTCTATTTACAGTTTGGATTTGAGTTTCAATGAGTTAGGGGCTAACTTACCAAAGGTGATGGAAAATTTAACTTCATTAGAAACATTGAAGCTGCAGGAAAATGACTTCACTGGGAAGATACCTATTGGATTTCTCAAGTTAATGAAATTGAAGGAATTGAACTTATCTTACAATCTTCTTGAAGGGGAAATTCCAAAGGGTAAGCCTTTGATTGACTTTCCTAAGAGTTGTTATTCTGGAAATAAAGGTTTATGTGGAAAACCTCTTAGTCCTTGTAAACTATGA 1935 0.3442 MDYQLLKFVAMLIMTAFGDTSLTIEACSPNDIKALMSFKNGIQIDTSGRLKKWVGLNCCKWEGIVCKNLTIRVKEINLPGFISKDGDLFQTQMTGLISPSIVLLTSLEVIDLGGLVGLSGIIPLTIGLHLTNLQKLYLYGNNLTGSIPENIGDLQNLQELALQENKLSGSIPLSIGRLKNLKRLLLYSNQFSGIIPYSLGNLRNLVELDFHDNALTGNIPDEIGKLQALENLDLSNNLLSGNLPSSLTNLTVISVMYLDTNYLEGTILFPSRPGEMSSLAFLRLHNNHLDGKIPSNFGYLVSLQRVSLSNNKLEGTLPSSIGNLISLTEFYISENFFSGLIPKSIGQISQLIMLNISRNFIEGPLPQEISSLQNLQTLDLSFNHLNLSYIPKWIANMSSLSRIYFAGCGIHGQIPDLLQTTISPIQELDLSMNLFNGIIPSWIGNLNQLYMLNLSKNYIHSHIPHSFRNLHDLAILDLHSNKLTGSISPIFDIEQQGIFGGSLRFVDLSDNKFSSGIEKIGVGEQCDIQFLNLSHNILKGVLPNAVGRMSSIYSLDLSFNELGANLPKVMENLTSLETLKLQENDFTGKIPIGFLKLMKLKELNLSYNLLEGEIPKGKPLIDFPKSCYSGNKGLCGKPLSPCKL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02054 644 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Car07g02054 644 Pfam Leucine rich repeat 425 483 IPR001611 GO:0005515
Car07g02054 644 Pfam Leucine rich repeat 180 239 IPR001611 GO:0005515
Car07g02054 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 643 - -
Car07g02054 644 Gene3D Ribonuclease Inhibitor 24 84 IPR032675 -
Car07g02054 644 Gene3D Ribonuclease Inhibitor 352 644 IPR032675 -
Car07g02054 644 SUPERFAMILY L domain-like 208 487 - -
Car07g02054 644 PRINTS Leucine-rich repeat signature 229 242 - -
Car07g02054 644 PRINTS Leucine-rich repeat signature 372 385 - -
Car07g02054 644 SMART LRR_typ_2 178 201 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 276 299 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 202 225 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 372 397 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 300 324 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 130 154 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 573 597 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 226 250 IPR003591 -
Car07g02054 644 SMART LRR_typ_2 446 469 IPR003591 -
Car07g02054 644 Gene3D Ribonuclease Inhibitor 85 268 IPR032675 -
Car07g02054 644 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Car07g02054 644 SUPERFAMILY L domain-like 56 267 - -
Car07g02054 644 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 3 643 - -
Car07g02054 644 Gene3D Ribonuclease Inhibitor 269 351 IPR032675 -
Car07g02054 644 SUPERFAMILY L domain-like 424 640 - -
Car07g02054 644 SMART LRR_sd22_2 372 392 - -
Car07g02054 644 SMART LRR_sd22_2 300 326 - -
Car07g02054 644 SMART LRR_sd22_2 470 495 - -
Car07g02054 644 SMART LRR_sd22_2 226 252 - -
Car07g02054 644 SMART LRR_sd22_2 154 175 - -
Car07g02054 644 SMART LRR_sd22_2 549 575 - -
Car07g02054 644 SMART LRR_sd22_2 130 153 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02054 2 644 Receptor kinase-like Gene Family AT4G08850 32.609 4.11e-88 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02054 - - gmx:102670178 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02054 07 24900677 24902839 Car07g02054 07 24900677 24902839 ECH