Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02021 ATGATGTACCAAAACAATCATCTAATACTTATTCTCCTACTACTCTTCTTGTTCCACTCCACATGTTTATCTTTCACTTTCCAACATAACAACAATGAATCTTCAAACCAAACATCTTCACTGAAAAATCAGATTCTAGAACTAGCTAACACACCCAACATGTTGAAATGGATGAAGAGTATAAGAAGAGAAATCCATGAGTACCCTGAACTTGCATATGAAGAATTCAAGACAAGTTCTGTCATAAGGCGTGAGCTTGATAATCTTGGTGTTGTTTATCAATGGCCTGTTGCTAAGACTGGTGTTGTAGCTAAAATTGGTTCTGGTTTTCCTCCTTTTGTTGCAATTAGAGCTGACATGGATGCTTTGCCTATTCAGGAACTGGTCGATTGGGATCATAAGAGCAAAGTTGATGGAAAAATGCATGCTTGTGCGCACGATGCACATAGCGCAATGCTTCTTGGGGCTGCAAAGATACTGCAAGAAATGAAAAACAAGTTAAAGGGGACTGTTGTTCTTATATTCCAACCAGCCGAAGAAAGAGGTGTAGGTGCGAAAGACATGATCGCAGAAAATGTGCTTGAAGATGTAGAGGCTATTTTTGGATTGCATTTAGTTACACAATATCCCTTAGGTGTTGTTGCTTCGCGATCCGGAGAGTTTTTAGCAGGATGTGGAAGCTTCAAAGCAAAGATCAATGGTGGTAAAGGAATTCACCAGCGTTGTTTCGATCCGGTTTTGGCAGCATCAGCATCTGTGATTAGCTTGCAAAACATTGTTTCGAGAGAGATTGATCCTTTAGATTCTCAGGTGCTTTCTGTGGCAACGGTTAATGCAGGGTCTGATTCTGTTACATTTGGAGGTACTTATAGAGCATTCAGCAAAAAGAGCTTCAATTCACTAAGGAAAAGGATAGAAGAGGTTATAAAAGGGCAAGTAGAAGTGCATAGGTGCGCCGCGGAGGTCGAATTCTTCGGTAGAGAACATCCGACGATTCCTCCGACTACAAATGATGATAGAATATACAAACTAGCAAGGCAAGCATCAAGCATGATTGTTGGAGAAGAAAACATAAAATTAGCCCCAACTTGGACAGGGAGTGAAGATTTTGCATTTTACATGGATAAAGTGCCTGGTGCATATTTCCTTTTGGGTATAGAAAATGAGAAGAGTGGATCAATATATTCAGGTCATAGTCCTCACTTTTTCATTGATGAAGATGTTCTTCCTATTGGTGCTGCAATACATGCAGCATTTGCTCTTTCATATTCAACAATTTCTTAA 1284 0.3972 MMYQNNHLILILLLLFLFHSTCLSFTFQHNNNESSNQTSSLKNQILELANTPNMLKWMKSIRREIHEYPELAYEEFKTSSVIRRELDNLGVVYQWPVAKTGVVAKIGSGFPPFVAIRADMDALPIQELVDWDHKSKVDGKMHACAHDAHSAMLLGAAKILQEMKNKLKGTVVLIFQPAEERGVGAKDMIAENVLEDVEAIFGLHLVTQYPLGVVASRSGEFLAGCGSFKAKINGGKGIHQRCFDPVLAASASVISLQNIVSREIDPLDSQVLSVATVNAGSDSVTFGGTYRAFSKKSFNSLRKRIEEVIKGQVEVHRCAAEVEFFGREHPTIPPTTNDDRIYKLARQASSMIVGEENIKLAPTWTGSEDFAFYMDKVPGAYFLLGIENEKSGSIYSGHSPHFFIDEDVLPIGAAIHAAFALSYSTIS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02021 427 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 3 424 - -
Car07g02021 427 PIRSF Amidohydrol_AmhX 43 426 IPR017439 GO:0016787
Car07g02021 427 Pfam Peptidase family M20/M25/M40 115 420 IPR002933 GO:0016787
Car07g02021 427 SUPERFAMILY Bacterial exopeptidase dimerisation domain 238 324 IPR036264 -
Car07g02021 427 SUPERFAMILY Zn-dependent exopeptidases 52 423 - -
Car07g02021 427 Gene3D - 223 333 - -
Car07g02021 427 Gene3D Zn peptidases 60 417 - -
Car07g02021 427 TIGRFAM amidohydrolases: amidohydrolase 59 412 IPR017439 GO:0016787
Car07g02021 427 CDD M20_IAA_Hyd 58 423 IPR044757 GO:0009850|GO:0016787
Car07g02021 427 PANTHER PEPTIDASE M20 FAMILY MEMBER 3 424 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02021 Car-Chr7 24012680 24016339 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02021 K14664 - gmx:100788267 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02021 07 24012680 24016339 Car07g02021 07 24012680 24016339 ECH