Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02006 ATGAACGCCTTGTTTTCACAGCTGTCATCATATACAGCTACTATAATCGGAAGAACCACACGATTCGTCGCTAACCATTCTATCAACGGAAACCCTAACGGTTTCTCGTTTCCGATTAAATCACAGTATTGTTGTGTTAGGTCTTTTCGTTCAGAATTCGCGGTGACAGTTACGAATACTCGGTGCTATTCAACTAAAAAAGGACGCAAGAGTGGTTCTTCTCAGTTGCATAAGGTGGAAACTGAAACAAAGATGGATCAGGAAAAGGATGCTTTCTATGTTGTAAGGAAAGGAGATGTTGTTGGAATTTATAATAGTCTCAGTGATTCTCAAGCTCAAGTTGGATCTTCTGTATGCGATCCTCCTGTTAGTGTATACAAGGGATATTCATTGTCAAAGGAAACCGAGGAATATCTTCTCTCGCATGGACTAAAAGATGCTTTATACACAATTAGAGCCTCTGATTTGACAGAGGATTTGTTCGGCACGCTTGCTCCTTGTCCTTTCCAGGATCCTTCTTCTAGCAAAGGGGCCACATCAAATGTGGATACATCTAAAAAGAGAGCTCTAGAAGTGCTTGAACAAGATAATGTGCCGAAAGTAACTGGTTCGACATCCCTCTCTGAAGACCCCTTGAGAAAGCAAGTCAAGTTAGATCATGCTGTTGTGGCCAAAGCATCTTCACTTGCAAATAAGACTTGTATTGTTGAGTTTGATGGTGCGTCAAAAGGAAATCCTGGAAGAGCTGGTGCTGGGGCTATTCTGCGATCTAAAGATGGGAATTTGATTTACAGGGTTCGTGAAGGCGTGGGTATAGCAACAAACAATGTTGCTGAATATCGTGCAATGATATTGGGAATGAAATATGCTCTTAAAAAAGGATTCACCAGTATCTCTATACAAGGGGACTCTAAACTTGTCTGCATGCAGATTGATGGTTCATGGAAAGTCAAGAATGAGAACTTGTCTACATTGTATAAGGTGGCCAAAGAACTCAAGGATAAATTTGTGTCATTCCAGATCAGTCATGTTCTAAGGGAGTTCAACTCCGAGGCTGATGCTCAAGCAAATTTGGCCATCCATCTTGCTGATGGCCAAGTTCAGGAAGAGTATGTAGGTTAA 1122 0.4135 MNALFSQLSSYTATIIGRTTRFVANHSINGNPNGFSFPIKSQYCCVRSFRSEFAVTVTNTRCYSTKKGRKSGSSQLHKVETETKMDQEKDAFYVVRKGDVVGIYNSLSDSQAQVGSSVCDPPVSVYKGYSLSKETEEYLLSHGLKDALYTIRASDLTEDLFGTLAPCPFQDPSSSKGATSNVDTSKKRALEVLEQDNVPKVTGSTSLSEDPLRKQVKLDHAVVAKASSLANKTCIVEFDGASKGNPGRAGAGAILRSKDGNLIYRVREGVGIATNNVAEYRAMILGMKYALKKGFTSISIQGDSKLVCMQIDGSWKVKNENLSTLYKVAKELKDKFVSFQISHVLREFNSEADAQANLAIHLADGQVQEEYVG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02006 373 Pfam Reverse transcriptase-like 238 359 IPR002156 GO:0003676|GO:0004523
Car07g02006 373 CDD RNase_HI_like 234 361 - -
Car07g02006 373 PANTHER PUTATIVE-RELATED 103 368 - -
Car07g02006 373 Gene3D - 89 140 IPR037056 -
Car07g02006 373 ProSiteProfiles RNase H type-1 domain profile. 230 361 IPR002156 GO:0003676|GO:0004523
Car07g02006 373 SUPERFAMILY Ribonuclease H-like 232 357 IPR012337 -
Car07g02006 373 Gene3D - 232 364 IPR036397 GO:0003676
Car07g02006 373 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 103 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02006 Car-Chr7 23659192 23666744 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g02006 - - gmx:100809644 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02006 07 23659192 23666744 Car07g02006 07 23659192 23666744 ECH