Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01979 ATGGGTAAGCAATTTTTGTTACTGTCTCTCATTCTTCAGCTTCTCTTTGGAACCCTCTCAGTCTCAGCTGCACCTTCCAACACTTCTCCTGCAAAAATTGTTACTGGGTTGCTCTCCAATGCTGTTCCTGCTTTTACCAAATGGGTTTGGTCTCTTAAAGCCACCACCAAAACAGGGGTTTTGAGCAAGTCAATGATGAAGTTTGAGAGTGGTTACAATGTGGAGACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCTGTTGAGTTGTTGCAAAATGGGGAGCTTCTCATTCTTGATTCTGATAATAGTAACCTTTATAGAATCTCTTCATCACTCTCTTTGTATAGCAGACCGAAGCTGGTGGCTGGATCAGCTGAAGGTTACTCTGGACATGTTGATGGGAAGCTCAGGGAGGCTAGGTTGAACCACCCAAAGGGGATAACCGTTGATGACCGAGGAAATATATATGTTGCAGATACTGCAAATATGGCAATTAGGAAAATTAGTGATTCAGGTGTCACAACAATTGCTGGAGGGAAGTGGAGTCGTGGAGGGGGCCATGTTGATGGACCAAGCCAAGAAGCTAAATTTTCTGAAGACTTTGATGTGGTTTATGTTGGAAGTAGTTGTTCCCTACTCGTTATAGACAGAGGAAACCAAGCCATCAGGGAGATCCAACTTCACTTTGCCGATTGTGCATATCAATATGGCAGTGGATTCCCTCTTGGAATTGCCATGCTTGTTGGGGCTGGCTTCTTTGGTTATATGCTGGCATTGCTGCAGCGTAGGCTTGGTACAATTGTAGAATCTCAAGATGTTCCAGCAACAGCAATGCCTTCTGTTTCTCCAAGTCCATATCAAAAGCCCTTGAAATCTGTGAGGCCTCCTTTAATTCCATCAGAATACGAACCCGATAAGCAGGAAGAAGGTTTCTTTGGATCTCTCGGTAAGCTTCTTGCCAACACCGGCACATCAATGGTGGAGATAATGGGAGGGTTATTTCCTTCTTTCAGAAGAAAACCGCAAAGCTACCAATTTCAAAGGCAAACACTGATCCAACAACAACAACCTCAGAAGCAAGTGAATGATTGGCCAGCACAGGAAAGTTTCGTGATTCCTCGTGAAGACGAACCCCCGTCTATCGACACAAGGGCCCCAACGCCTCGAAAAACCTATCCTTTCATGTCGAAAGATGCGGAAAAAATGCAACAGCTGCGACAAAGTAAAGCGTTCTATAGCGGCTGGGATGGAGACcagcagcaacaacaacaacaacaacaaaaacatcatcatcgccatcaGTACCAATCATCAGTCCCACACACTTTCTATGAGCAGAGCAATGAGACGACCAATGAGGTAGTTTTTGGGGCGGTGCAGGAACATGACAGGAAAAAGGAACCTGTGGTTATCAAGCCTGTTGAATATGGGGGCTCTCTGTACGAACATCACGATTTTCGGCCTCGAATGAGTTCCATGGGTTATACTTATACCCATAAGTATTGA 1515 0.435 MGKQFLLLSLILQLLFGTLSVSAAPSNTSPAKIVTGLLSNAVPAFTKWVWSLKATTKTGVLSKSMMKFESGYNVETVFDGSKLGIEPYAVELLQNGELLILDSDNSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARLNHPKGITVDDRGNIYVADTANMAIRKISDSGVTTIAGGKWSRGGGHVDGPSQEAKFSEDFDVVYVGSSCSLLVIDRGNQAIREIQLHFADCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVESQDVPATAMPSVSPSPYQKPLKSVRPPLIPSEYEPDKQEEGFFGSLGKLLANTGTSMVEIMGGLFPSFRRKPQSYQFQRQTLIQQQQPQKQVNDWPAQESFVIPREDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSKAFYSGWDGDQQQQQQQQQKHHHRHQYQSSVPHTFYEQSNETTNEVVFGAVQEHDRKKEPVVIKPVEYGGSLYEHHDFRPRMSSMGYTYTHKY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01979 504 ProSiteProfiles NHL repeat profile. 144 174 IPR001258 GO:0005515
Car07g01979 504 PANTHER - 1 501 - -
Car07g01979 504 PANTHER NHL REPEAT PROTEIN 1 501 - -
Car07g01979 504 MobiDBLite consensus disorder prediction 418 440 - -
Car07g01979 504 Gene3D - 27 229 IPR011042 -
Car07g01979 504 Pfam NHL repeat 144 170 IPR001258 GO:0005515
Car07g01979 504 SUPERFAMILY NHL repeat 73 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01979 Car-Chr7 23176741 23183577 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01979 - - mtr:MTR_8g063760 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01979 07 23176741 23183577 Car07g01979 07 23176741 23183577 ECH