Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01971 ATGGAGGaacaacaacaacagccacaacaaGAGAAGCGTCCTCTTTCTCTCGACTGGAACGCTCTAATCGACGGCGATGAAGCGCCGCCGGCGGAACTTGTCGTGAAGTCTTCTGTTATGACGTCTGATCAGGAGCCTCCGGTTTTCATCGAAGGTCTTGATCGACTGAAAGATTACGAACTCGAGGAACAAATTCGGAGAAAGAAGAAGCTTCTCGAGACTTCCGGTAAAAAGTTACCCGATGGAGGGGCTAAACTTCGTGCTATGGTCAAACGCTATGAAGAAGAGTTTAATAGCCGAAAATCCAACCCTCGTCCTCAGAAAGTTGACGAGGAGCAGAAGCCAGTACAGGCTACAAGCTCAGGTGCTGTTGGTGTGGCTAATGACTTGAGACAAGAGTGTTTGCCATCTCGACCACAGTCACAACCCTCTTTTGCAACTTGTTTTTACAAGAAAATAGAAGATAATACTAATTGTGCGGCTGTTGATGCATTTAGCGAAGAGATGCCGCATTTCAAGCAATGCAAAAATGCCAACAACCAAACAGTGAGCCACAATGGAGAACATAAAAGAAGAAAGAGACACCGTCGATCATCTTCAAGACATTTGCCATATAAATGTCCCAGCAAACCTTCCAAACGTGATACTTCTGATGATGATAAAAGTTGCCGAGCAAATTCTACTTTATCCGTACGGACCATTAAAATGAACCTATCAAGACGCTTATCAAAAGAAAAGGGTGCATCTCAGGAAATTCAATCAGATTGCTCAAGGTCCCGGAAGGGTCAACCCATTGTTCTTgatgacgacgacgacgacgacgaagaagaagaTCCTCATGTTCTGGAGAAAACAGAATACAAAGTTCCTGAATATTTGAAAGAAGCCAAGACCTATTTTCCATCAAGAGATGATCCAGAGTCTGTTGAAATTTGTTATAATGACATGGAATGCCTTGCCCCTGAAGGCTACTTAACATCGACTATCATGAACTTTTACATACGATATTTGCAGCAGCAAGTATCTCCGACAATATCTGACTACCATTTTTTCAACACATATTTCTACAAAAAACTTAAAGAAGCTGTTTCCTGCAAGGAAAGTAACAGAGAGACGATCTTTGCAAAGTTCAGAAGGTGGTGGAAGGGTGTAAATATTTTTCAAAAGGCCTATGTTTTGATTCCTATACACCAGGATCTTCATTGGAGCTTGATCATTATTTGTATCCCAGACAAAGAAGATGAATCAGGACCAATCATACTTCATCTGGATTCTTTGGGTCTTCACTCGAGTAGATCAGTTTTTAATAATATTAGAAGCTATTTGATTGAAGAAAGGAACTATTTGAGTCGAGAATGTGCATCTTCAGATGTTCCAATTGCAGACAGAATATGGAAGTGTCTTTCTCGTAGAATTGAAACTCAAGCTATAGCCGTAAGTTTCTGTGCTGTAAATCTAGAATCATGTACTGTTGATAGTTTTATACTACCCACGTAA 1497 0.3935 MEEQQQQPQQEKRPLSLDWNALIDGDEAPPAELVVKSSVMTSDQEPPVFIEGLDRLKDYELEEQIRRKKKLLETSGKKLPDGGAKLRAMVKRYEEEFNSRKSNPRPQKVDEEQKPVQATSSGAVGVANDLRQECLPSRPQSQPSFATCFYKKIEDNTNCAAVDAFSEEMPHFKQCKNANNQTVSHNGEHKRRKRHRRSSSRHLPYKCPSKPSKRDTSDDDKSCRANSTLSVRTIKMNLSRRLSKEKGASQEIQSDCSRSRKGQPIVLDDDDDDDEEEDPHVLEKTEYKVPEYLKEAKTYFPSRDDPESVEICYNDMECLAPEGYLTSTIMNFYIRYLQQQVSPTISDYHFFNTYFYKKLKEAVSCKESNRETIFAKFRRWWKGVNIFQKAYVLIPIHQDLHWSLIIICIPDKEDESGPIILHLDSLGLHSSRSVFNNIRSYLIEERNYLSRECASSDVPIADRIWKCLSRRIETQAIAVSFCAVNLESCTVDSFILPT 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01971 498 MobiDBLite consensus disorder prediction 187 203 - -
Car07g01971 498 Pfam Ulp1 protease family, C-terminal catalytic domain 324 446 IPR003653 GO:0006508|GO:0008234
Car07g01971 498 Gene3D Adenoviral Proteinase; Chain A 266 476 - -
Car07g01971 498 PANTHER - 15 481 - -
Car07g01971 498 MobiDBLite consensus disorder prediction 208 222 - -
Car07g01971 498 MobiDBLite consensus disorder prediction 173 282 - -
Car07g01971 498 ProSiteProfiles Ubiquitin-like protease family profile. 309 464 IPR003653 GO:0006508|GO:0008234
Car07g01971 498 MobiDBLite consensus disorder prediction 92 112 - -
Car07g01971 498 MobiDBLite consensus disorder prediction 223 237 - -
Car07g01971 498 MobiDBLite consensus disorder prediction 92 142 - -
Car07g01971 498 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 15 481 - -
Car07g01971 498 SUPERFAMILY Cysteine proteinases 295 452 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01971 Car-Chr7 22901651 22915801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01971 K16287 - gmx:100790705 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01971 07 22901651 22915801 Car07g01971 07 22901651 22915801 ECH