Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01955 ATGGCAGACTCTGTTGATGTTACTCACGATCTTCACTCCCTCCTCTCTTCTCCCGATAGAGACTTTCTTCTTCGTAACAACGGCGATCAGGTTAAAATTGACAGCTTGAAGGGGAAGAAACTTGGTTTATACTTTTCAGCATCATGGTGTGGTCCGTGTCGAGGTTTCACACCAACATTGGTTGAGGCGTACAATGAACTCTCTCCAAATGGTGAGTTTGAGGTCGTTTTTATCACAGCTGATGAGGATGATGAAGCCTTTAAAAGCTACTTTTCCAAGATGCCGTGGTTGGCTATCCCGTTTTCTGATTCAGATACACGCAATCGCCTTGATGAACTGTTTCATGTAAATGGAATTCCTCATCTTGCATTGCTTGATGAAACTGGCAAAGTTGTCGCCGAAGATGGAGTTGACATTATCCGTGAATATGGACCTGAAGCATTCCCTTTCACATCGGAAAGGATCCAAGAGTTAAAAGATCAAGAAGAGGAAGCTAAGAGGAATCAGTCCTTGAGATCTATTTTGGGCTCTCGTTCCCGTGATTTTGTGATATCATCCGATGGAAAAAATATACCTATCTCTGAGCTTGAGGGAAAGACAGTTGGTCTGTATTTCTGTGCAAATTCGTACAGATCATGCACTACATTTACTTCACAGCTTAAGGATGTTTACAAGAAGCTGAAGGCGGAGGGGGAGAACTTTGAGGTTGTGGTGATACCCTTAGATGACGAGGAAGAGTCATTGGAGAAAGAATTAGAAAGTGTGCATTGGTTATCCTTGCCTATCAAGGACAAAACATGTGCGAAACTAGTTCAGTACTTTGAACTATCAGCCCTTCCCACCTTGGTTATTATTGGGCCAAATGGGAAAACTCTTCATCCTAATGCTGCTGAGATCATTGAGGATCATGGGATCACTGCATATCCATTCACTCCTGAAAAGCTTGCTGAACTCGAAGAAATAGAGAAGGCCAAGGAGGCAACTCAAACAATTGGGTCAGTTTTGGTGTCTGGGGATCGAGATTTTGTGATTGAGAAAGATGGGGAGAAGATTCCGGTGTCAAAATTAGAGGGGAAGACCGTCCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCATGTCGTGCATTTCTTCCAAAACTCATTGATGCATACCATAAGATTAAGGCACAAGACAATGATGCACTTGAAGAGTTCCTGAGTCGGAAATTCAAGGTATCTGGCATCCCGAAGCTTGTGGCTATCGGATCAAATGGCCGGACTGTCACAAAAGAAGCTCGAGATCTGGTTGCGCTTTATGGAGCAGATGCTTATCCTTTTACCGAGGAGAGAATAAAAGAAATAGAGGCACAAAATGATGACATTGCAAAGGGGTGGCCTGAGAAGGTGACGCACAAAACACATGAGCATGAGCTTGAGTTGACGCGCCGCAGGGTATATTACTGTGATGGTTGTTCTGAGGAGGGACATGTTTGGTCATACTACTGTGAAGAGTGTGACTTTGATCTCCATCCAAAGTGTGCACTGGAAGACAAAGAAAGCATAGATCATGCCAAGGAAGAAGAGAAGACCAAAGAAGGATGGGTTTGTGAAGGAGATGTCTGCACCAAAGTCTGA 1614 0.4405 MADSVDVTHDLHSLLSSPDRDFLLRNNGDQVKIDSLKGKKLGLYFSASWCGPCRGFTPTLVEAYNELSPNGEFEVVFITADEDDEAFKSYFSKMPWLAIPFSDSDTRNRLDELFHVNGIPHLALLDETGKVVAEDGVDIIREYGPEAFPFTSERIQELKDQEEEAKRNQSLRSILGSRSRDFVISSDGKNIPISELEGKTVGLYFCANSYRSCTTFTSQLKDVYKKLKAEGENFEVVVIPLDDEEESLEKELESVHWLSLPIKDKTCAKLVQYFELSALPTLVIIGPNGKTLHPNAAEIIEDHGITAYPFTPEKLAELEEIEKAKEATQTIGSVLVSGDRDFVIEKDGEKIPVSKLEGKTVLLYFSAHWCPPCRAFLPKLIDAYHKIKAQDNDALEEFLSRKFKVSGIPKLVAIGSNGRTVTKEARDLVALYGADAYPFTEERIKEIEAQNDDIAKGWPEKVTHKTHEHELELTRRRVYYCDGCSEEGHVWSYYCEECDFDLHPKCALEDKESIDHAKEEEKTKEGWVCEGDVCTKV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01955 537 SUPERFAMILY Thioredoxin-like 343 423 IPR036249 -
Car07g01955 537 Pfam Thioredoxin-like 358 390 IPR012336 -
Car07g01955 537 Pfam Thioredoxin-like 198 290 IPR012336 -
Car07g01955 537 Pfam Thioredoxin-like 39 131 IPR012336 -
Car07g01955 537 SUPERFAMILY Thioredoxin-like 24 133 IPR036249 -
Car07g01955 537 ProSitePatterns Thioredoxin family active site. 362 380 IPR017937 -
Car07g01955 537 Gene3D Glutaredoxin 335 393 - -
Car07g01955 537 Gene3D Glutaredoxin 15 152 - -
Car07g01955 537 Gene3D Glutaredoxin 176 311 - -
Car07g01955 537 SUPERFAMILY Cysteine-rich domain 457 508 IPR046349 -
Car07g01955 537 PANTHER NUCLEOREDOXIN 1-2-RELATED 6 393 - -
Car07g01955 537 PANTHER THIOREDOXIN 6 393 - -
Car07g01955 537 PANTHER THIOREDOXIN 393 508 - -
Car07g01955 537 ProSiteProfiles Thioredoxin domain profile. 318 449 IPR013766 -
Car07g01955 537 Pfam C1 domain 466 507 IPR004146 -
Car07g01955 537 ProSiteProfiles Thioredoxin domain profile. 11 160 IPR013766 -
Car07g01955 537 CDD TryX_like_TryX_NRX 21 150 IPR045870 GO:0004791
Car07g01955 537 PANTHER NUCLEOREDOXIN 1-2-RELATED 393 508 - -
Car07g01955 537 SUPERFAMILY Thioredoxin-like 184 293 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01955 Car-Chr7 22470196 22472939 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01955 K17609 - gmx:100809224 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01955 07 22470196 22472939 Car07g01955 07 22470196 22472939 ECH