Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01946 ATGTGGACTAACATAGTCAAGCGAGCTTCCTCTAAGAAGTTCAACCTATCCTACTCAATttcttcttcttcttcttcttcACTGAGATTTTCTCAGCACTCCAATTTTCCCGAGAAAATCTTGCCCCAAACAAGGATAATTAATTCAAGGCACCCGTTTTTTGGTTTCAGTCAAGTTAGTATCTTTAATTCGGAAAACAAATTGGGTCGATCCAATCTTTCGTTTTCTGAAGACCCTTTTACGTTTTCTTCAACTTCAGTGGCTCACTTTAGAGGTTACGGTAGTGTTGCTGAAGCTATTGAATCATCCGATACAGAAGATGATCATTCAGGTTGTGAAGAAGTTCAGAAACTGTTAGAAGAAATGGTAAAAGAGGAAAAGAAAAAGCCTGAATTAGAGAACCAAAAGAACAATAGTGGAGGAGGCATGGCTAGTTACAAGTATAAAATGCTTAAAAGGAGACAGATAAAGATTGAGACTGAGGCTTGGGAAGAAGCAGCAAGAGAGTATCAGGAATTGTTGGAGGATATGCGTGAGCAGAAACTTGCACCTAATTTGCCTTATATGAAATCATTGTTTCTTGGTTGGTTTGAGCCTTTAAAGAATGCAATTGCTGATGATCAAGAGCTTTGTAAAGATTATAGGCATAGGGCGAGTCATTCTCCTTATTTCAATGAGTTGCCGCCTGATATGATGGCTGTTATCACTATGCATAAGTTGATGGGGTTGTTGATGACTAATAGTAATGGTGTTGGTAGTGCTAGAGTTATCCAAGCTGCTTGTCAAATAGGTGAAGCCATTGAACACGAGGGTAAGATATACCGATTTATGGAGAAGACAAAGGGGAAGAAAACAACCACTGGCAAGTCTGCTGGTGAATCTGTTCTTGCACCTGTAAAAATCGACGAAATGACAGCTGAAGAGAAAGAGAAATTTAAAAAAGAGCAGACAAGACTTAGGAGAAAAGTTGCTAGTTTAATAAAAAAGCAGAAGACGCAACAAGCTATGGGGATAGTTCGTGGAAGGGACGAAGGGAAGCCTTGGGGACAGGAAGCCCAAGTGAAGGTCGGCTCTCGTTTGGTACAACTGTTAATAGAAACTGCTTACTTACAACCACCTGCCAATCAATTTGGAGACAGTCCACCAGATATTTACCCTGCGTTCAAGCATACCCTCAAAACAGTTTCTGCCGATTCAAACAATGGAAGTAAAAGATATGGCGTTATTGAATGTGACCCTCTGATACAAAAGGGCCTTGAAAAGACTGCCAGGCACATGGTTATCCCCTACATGCCAATGTTGGTTCCACCTACTAACTGGACAGGGGATGACAAAGGGGCATACTTGTTTTTGCCATCATATGTAATGAGAATACATGGAGCAAAGCAGCAACGTGAAGCTGTAAAAAGGGCTCCCAAGAATCAACTTAAACCAGTATTTGAGGCCCTTAATACCCTTGGTGATACAAAATGGAGGGTAAACAAAAGTGTACTTGGCGTGATAGATCAAATATGGGCTAATGGAGGCCGCTTGGCTGACTTGGTGGATCGCGATGATACTCCCCTCCCAGAGGAACCAGACACAGAAGACGAAGCAGAAATCCGAAAATGGAAGTGGAAAGTTAAATCCGTCAAAAAGGAGAACAGTGAGAGACATTCACAGCGATGTGACATAGAACTTAAACTGGCAGTTGCTCGAAAGATGAAAGAAGAAGAAGGCTTCTACTATCCTCACAATCTTGATTTCAGAGGGCGTGCGTATCCCATGCACCCATATTTGAACCATCTTGGTTCTGATTTATGTCGAGGCATACTTGAGTTTGCAGAGGGACGTCCTCTGGGGAAGTCTGGCATGCAATGGTTGAAAATACATCTGGCAAATTTATATGGCGGTGGTGTTGACAAGTTATGTTATGACGGTCGAATAGCATTTACTGAGGACCACCTGGATGATATTTTTGATTCTGCAGACAGACCTCTTGAAGGAAAGCGGTGGTGGTTGCAAGCAGAGGATCCTTTTCAGTGCTTGGCAGCATGTATCAATCTTTCCGAAGCATTGAGAAGCGACACTCCCGAGACTACCCTTTCTCATATGCCTGTACACCAGGATGGTTCATGCAATGGCTTACAACACTATGCAGCACTTGGTAGGGACAAGTTGGGAGCTGCTGCAGTCAATCTTGTTGGTGGAGACCAGCCTGCTGATGTTTACTCGGGAATTGCTGCCAGAGTACTTGAAATCATGAAAAGTGATGCATTGAAAGATCCCAAAACTAATCCACATGCGTTGCATGCTAGGCGATTGATCAGCCAGGTGGACCGAAAGTTGGTGAAGCAGACAGTGATGACATCGGTCTATGGAGTGACTTATATTGGGGCCCGGGACCAGATCAAGAGAAGGCTTAAGGAGCGTTGTGCGATTGAGGATGATTCAGAGCTGTTTGCTGCTTCATGCTATGCTGCAAAAACTACTCTCACTGCCTTAGAAGAGATGTTTGAGGCTGCAAGAAGTATTATGAGTTGGCTAGGTGATTGTGCAAAGGTGATAGCTTCCACAAACCAAGCAGTGCGATGGGTCACCCCCCTTGGGCTTCCCGTAGTACAACCTTACAGAGAAATAGGAAGACATCTGATCAAGACTTCCCTTCAGGTATTGACGTTACAGCGGGAGACTGACAAGGTCATGGTAAAAAGGCAGAGAACAGCTTTTCCCCCAAATTTTGTTCACTCTCTTGATGGTTCTCACATGATGATGACTGCAGTCGCTTGTAAAAAAGCAGGGATGAGCTTTGCAGGGGTTCATGATTCTTATTGGACACATGCATGTGATGTTGACGAAATGAACAGGATACTCAGGGAAAAGTTTGTTGAACTCTACGAGGCTCCAATATTGGAAAATTTATTGGAAGATTTTGAGAAGACTTTTCCCACATTGAAGTTTCCTCCTTTACCAGAACGGGGAGACTTTGATCTTCGACAGGTTTTGGAGTCTCCCTATTTTTTCAACTAG 3009 0.4287 MWTNIVKRASSKKFNLSYSISSSSSSSLRFSQHSNFPEKILPQTRIINSRHPFFGFSQVSIFNSENKLGRSNLSFSEDPFTFSSTSVAHFRGYGSVAEAIESSDTEDDHSGCEEVQKLLEEMVKEEKKKPELENQKNNSGGGMASYKYKMLKRRQIKIETEAWEEAAREYQELLEDMREQKLAPNLPYMKSLFLGWFEPLKNAIADDQELCKDYRHRASHSPYFNELPPDMMAVITMHKLMGLLMTNSNGVGSARVIQAACQIGEAIEHEGKIYRFMEKTKGKKTTTGKSAGESVLAPVKIDEMTAEEKEKFKKEQTRLRRKVASLIKKQKTQQAMGIVRGRDEGKPWGQEAQVKVGSRLVQLLIETAYLQPPANQFGDSPPDIYPAFKHTLKTVSADSNNGSKRYGVIECDPLIQKGLEKTARHMVIPYMPMLVPPTNWTGDDKGAYLFLPSYVMRIHGAKQQREAVKRAPKNQLKPVFEALNTLGDTKWRVNKSVLGVIDQIWANGGRLADLVDRDDTPLPEEPDTEDEAEIRKWKWKVKSVKKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGMQWLKIHLANLYGGGVDKLCYDGRIAFTEDHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACINLSEALRSDTPETTLSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVGGDQPADVYSGIAARVLEIMKSDALKDPKTNPHALHARRLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARSIMSWLGDCAKVIASTNQAVRWVTPLGLPVVQPYREIGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGMSFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEDFEKTFPTLKFPPLPERGDFDLRQVLESPYFFN 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01946 1002 SUPERFAMILY DNA/RNA polymerases 143 1002 IPR043502 -
Car07g01946 1002 Pfam DNA-directed RNA polymerase N-terminal 154 487 IPR029262 -
Car07g01946 1002 Gene3D - 611 689 - -
Car07g01946 1002 PANTHER DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL 1 1002 IPR002092 GO:0003677|GO:0003899|GO:0006351
Car07g01946 1002 Gene3D - 489 571 IPR024075 GO:0003899
Car07g01946 1002 Coils Coil 160 183 - -
Car07g01946 1002 ProSitePatterns Bacteriophage-type RNA polymerase family active site signature 2. 772 786 IPR002092 GO:0003677|GO:0003899|GO:0006351
Car07g01946 1002 Coils Coil 115 135 - -
Car07g01946 1002 Gene3D - 132 487 IPR037159 -
Car07g01946 1002 PANTHER DNA-DIRECTED RNA POLYMERASE 1 1002 - -
Car07g01946 1002 Pfam DNA-dependent RNA polymerase 611 1002 IPR002092 GO:0003677|GO:0003899|GO:0006351
Car07g01946 1002 ProSitePatterns Bacteriophage-type RNA polymerase family active site signature 1. 699 710 IPR002092 GO:0003677|GO:0003899|GO:0006351
Car07g01946 1002 Gene3D - 720 909 - -
Car07g01946 1002 Coils Coil 309 329 - -
Car07g01946 1002 SMART RPOL_N_2 153 488 IPR029262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01946 Car-Chr7 22334532 22344633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01946 K10908 - gmx:100814762 1490.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01946 07 22334532 22344633 Car07g01946 07 22334532 22344633 ECH