Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01909 ATGTGTGTTCAACCTATCAAGAAAACCTCATCAGcttctccttctccttctccctcttcttcttcttctccAGAACCTAGCTCCTCACCCGAACCTAATAACTCCACACCCGAACCTCCTTCTAATTCACGCAAAAGAATCACACCCGAACCCGGTACTCTTTCTTCTCCCATACCTGCtcctgatcccaaaccaaatcccgaacctaaccctaaccctCACAATGCAGAACCTCCTACTCCAACACCTCCCAAACCAACCTCCCGACGCAAACCTCCACCACCACCGCCGACTGCCGCCCAAATCGCAGCGGCTTTCGGCGAAGAAGTGTTCGACGATCTTCCGTCGTTAACTGAACCGGAACCGGAACCACTGAACATGGTATTTCCTTCGTATGATATTTACCCAGATATGCTTTGCAAAGATTGGACTTCTTCTTCGTGGATCAATAAATTCGACGAAGAAACCTCCGTTCTTGGTCCTGCTCCTTCAAGCCCTGAAGAGGATTACGATGGACCGTTTCGTATTCGTACAAATCTTGATTCGTTGTATCGTCGTAGAAGAAATTTTGAAATTCGTAGTGATACCTCCTCTTTGAATTCTACACCCTTTGATTATTACGGTTTTCAATCTGACGCGCTGCCTACGTCACCTTCATCGAAATTAGTGGGAGCTGGAATTTCTAATTTGGGAAACACGTGTTTTATGAGTGCTATACTTCAGTGTTTTACACACACTGTGCAACTGTTTCTTGGTCTTCGTTATTCAACTCATAATTCTCCTTGTAATGTGGTTGGTTTCTGCGCTATTTGTGCTTTCCGTCAACACATTAACGCTTCCTTAGAACCTTCTCGAAATCCAGTTTTACCTACGATGCTTGTTGAAAATTTGAACCAATTTTCATCTAGTTTTAGAAAACATCAGCAGGAGGATGCACACGAGTTTATGCAATGCGCATTGAATAAACTTCAAAGATGTTTTCCAATTGGAGAAGATAATCTAGTTGATCAAATATTTGGGGGTCGTCTTGTCAGTAAACTTCGATGTTGCTGCTGTGGTCACACTTCTGATACTTTCGAGCCAATTATTGACTTGAGTTTAGAAATAGAAGATGTGAGTACCATTCAATGTGCTCTGGAATCTTTCACAATGGTAGAAAAGATGGATTCAAAGTTTACATGTAGTAGCTGCAACGAAGTAGTTACCATGGAGAAACAGCTTATGCTTGATAAAGCACCTTCAGTTGCTGCATTTCATTTGAAAAGGTTTAAAAAAGATGGAAACACTGTCAAAAAGGTTGACAGTCATGTTTATTTCACTAAGGACTTGGATTTGCAGCCTTATACCTCTGCTAATGGCAGTGACATTGTACCTTTGAAATATGATCTATATGCAGTTGTTGAGCATAGGGGATCTTCCCCAAATTCAGGGCATTACTTTTGCTTTGTTCGTTCTTCTCCAGACAAATGGCATTTGATGGATGACTCTATGGTTTCTAGTGTTTTTGAAGAGGAGGTCCTGACTCACGAGGCATACATACTGTTTTATGCACGACAAGGTACACCTTGGTTTTCGAGTGTGGTGGAAAATGAAGAGAAAGTTCCAAATTCAAGTTCAGACAATAAACATGATTCTGATGAAGGACAAAAGGGTAATAAACATGATTCTGATGAGGGACAGAAGGGTAATAATAAACATGATTCTGAAGAGGGACAGAAGGGTAATAATAAACATGATTCCGATGAGGGACAAAAGGGTAATAAACATGATTCTGATGAGGAACAAAAGGGTAAATGTGATTCGACGGAAGCATATGATAAGTGTGTGACTGACATGGAAGAAGATGAAGATGAAGTTGATTCCATGATCTCAGACTTGACACATTCATCTAAATCTAGCTAA 1902 0.3917 MCVQPIKKTSSASPSPSPSSSSSPEPSSSPEPNNSTPEPPSNSRKRITPEPGTLSSPIPAPDPKPNPEPNPNPHNAEPPTPTPPKPTSRRKPPPPPPTAAQIAAAFGEEVFDDLPSLTEPEPEPLNMVFPSYDIYPDMLCKDWTSSSWINKFDEETSVLGPAPSSPEEDYDGPFRIRTNLDSLYRRRRNFEIRSDTSSLNSTPFDYYGFQSDALPTSPSSKLVGAGISNLGNTCFMSAILQCFTHTVQLFLGLRYSTHNSPCNVVGFCAICAFRQHINASLEPSRNPVLPTMLVENLNQFSSSFRKHQQEDAHEFMQCALNKLQRCFPIGEDNLVDQIFGGRLVSKLRCCCCGHTSDTFEPIIDLSLEIEDVSTIQCALESFTMVEKMDSKFTCSSCNEVVTMEKQLMLDKAPSVAAFHLKRFKKDGNTVKKVDSHVYFTKDLDLQPYTSANGSDIVPLKYDLYAVVEHRGSSPNSGHYFCFVRSSPDKWHLMDDSMVSSVFEEEVLTHEAYILFYARQGTPWFSSVVENEEKVPNSSSDNKHDSDEGQKGNKHDSDEGQKGNNKHDSEEGQKGNNKHDSDEGQKGNKHDSDEEQKGKCDSTEAYDKCVTDMEEDEDEVDSMISDLTHSSKSS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01909 633 MobiDBLite consensus disorder prediction 535 608 - -
Car07g01909 633 MobiDBLite consensus disorder prediction 19 37 - -
Car07g01909 633 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 226 241 IPR018200 GO:0004843|GO:0006511
Car07g01909 633 PANTHER UBIQUITINYL HYDROLASE 1 215 595 - -
Car07g01909 633 SUPERFAMILY Cysteine proteinases 222 518 IPR038765 -
Car07g01909 633 MobiDBLite consensus disorder prediction 1 18 - -
Car07g01909 633 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 215 595 - -
Car07g01909 633 MobiDBLite consensus disorder prediction 530 633 - -
Car07g01909 633 MobiDBLite consensus disorder prediction 1 100 - -
Car07g01909 633 Pfam Ubiquitin carboxyl-terminal hydrolase 226 516 IPR001394 GO:0004843|GO:0016579
Car07g01909 633 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 225 519 IPR028889 -
Car07g01909 633 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 461 479 IPR018200 GO:0004843|GO:0006511
Car07g01909 633 Gene3D Cysteine proteinases 221 520 - -
Car07g01909 633 MobiDBLite consensus disorder prediction 54 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01909 Car-Chr7 21664759 21668035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01909 221 533 Miscellaneous Gene Families AT4G31670 33.434 3.77e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01909 K11855 - fve:101303715 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01909 07 21664759 21668035 Car07g01909 07 21664759 21668035 ECH