Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01854 ATGAAGTTTATGAAAGTAGGATCTCGTCCAGATACCTTCTACACTACAGAGTCAGTAAGATCAATCTCTTCTGAAGTTTCAAGTGACCTCATAATTCAAGTTAAAGGAACTAGATATCTTCTTCACAAGTTTCCACTGCTATCAAAATCTTTGCACCTACAAAGATTATGTTCAGATTCAATTGATTCACCAAATCATCAAATAGTACAACTCCCCGATTTTCCGGGTGGAATCGAACCATTTGAACTCTGTGCAAAATTCTGCTATGGAATCACAATAACTATAAGTCCATACAACTTTGTTTCTGTAAGATGTGCTGCAGAATATTTACAAATGACAGAAGATGCAGAAAAAGGTAACTTGATTTACAAGTTAGAAGTTTTCTTCAATTCTTGTGTCCTTAAAGGTTGGAAAGATTCAATTGTGACATTACAAACCACAAAAAAGGAATTGTCTTTATGGTCCGAGGATTTGTCGATTACAACTAGATGCATTGAAGCTATTGTTTCAAAAGTGATTTTGTATCATAGAAATGATGATGTATCTTGTAGTGGAACAGAAAGTAAAAGATGGTGGGGTGAAGATTTATCAGAAATGAGATTAGATCTTTATTGGAGGATTATGATAGCTATTAAATCTTGTGGAAAGATACAATCAAATATAGTTGGTGATGCTTTGAAAGTTTATGCTTATAGATGGTTAACAAATATTCCAAAAATTCGGAATGATTCTGATTCTGGTTCTGATATTGATAAAGAAAGCGAAATAACTTCGAAGAACCGTTTGGTTTTGGAAACAATAGTGAGTTTGATTCCATCTGAAAAAGGTTCTGTTTCATGTAGCTTTCTTCTTAAACTATTGAATGCATCAAACATTTTGAATGTTTCTTCATCTTTGAAGATGGAATTGGCAAAAAGGGTAGGACTTCAATTGGAGGAAGCAACAGTGAATGATCTTTTAATACCTTCAATGACTTGTAGTGAAAATGATATGATTTATGAAGTGGATTTAGTTATGAATATATTGGAAGAGTTTATGTTGCAACAAGATCAAAGTACACCAACTAGTCCTTCAAGAAGGTTTGGTTCTGAGAGAAGGAGGTCGCGTTCGGCTGAGAATGTTGATTTTGAGTTGATTGAGAGTCGAAGGTCGTATTCTGCTTCGCATGGTTTGAAGTTAAAGGTTGCAAAGCTTGTTGATAAATATCTTCAAGAGATTGCTAAGGATGTGAATTTGCCTTTGTCTAAATTCATTGATGTTGCTGAAATTGTACCTGAATTTGCAAGACATGACCATGATGATCTATACATTGCTGTTGACACTTATCTTAAGGTTCATTCAGAATTCAACAAAACAGAAAGAAAAAAATTATGCAGAATTCTAGATTGCAAAAAACTATCCATGGAATCATGCATGCATGCAGCACAAAACGAGCTACTTCCACTAAGACTTGTTGTCCAAGTTCTCTTCATTGAGCAAGCAAGAGCAGCAGCATCTGGTGAAAAGGTTACTTGCATGTCAAGCAACATCAAAGCATTACTCGAAGCTAATGGAATTGACTCATCACGATTAAGTTCTACTACAAGTATACAACATGATGATAATTCAAGTGTTTCTGGATTCAAATCAACAAAGAATTCAAGTCTTAAGATGAAACTAGCAGAGGAGGAATTAGATGATGAAAATAATAATGATGTTGCAAGCAATGGAATTGGAAGAAGTTCTAGATTTAAAAGTCTTGGTTCTCTTCCTAATAAGCCTAAAAGAATGTTTAGTAAGTTTTGGTCTACCAATAGAAGAAGAGCTGAAAAGAATTGA 1818 0.3421 MKFMKVGSRPDTFYTTESVRSISSEVSSDLIIQVKGTRYLLHKFPLLSKSLHLQRLCSDSIDSPNHQIVQLPDFPGGIEPFELCAKFCYGITITISPYNFVSVRCAAEYLQMTEDAEKGNLIYKLEVFFNSCVLKGWKDSIVTLQTTKKELSLWSEDLSITTRCIEAIVSKVILYHRNDDVSCSGTESKRWWGEDLSEMRLDLYWRIMIAIKSCGKIQSNIVGDALKVYAYRWLTNIPKIRNDSDSGSDIDKESEITSKNRLVLETIVSLIPSEKGSVSCSFLLKLLNASNILNVSSSLKMELAKRVGLQLEEATVNDLLIPSMTCSENDMIYEVDLVMNILEEFMLQQDQSTPTSPSRRFGSERRRSRSAENVDFELIESRRSYSASHGLKLKVAKLVDKYLQEIAKDVNLPLSKFIDVAEIVPEFARHDHDDLYIAVDTYLKVHSEFNKTERKKLCRILDCKKLSMESCMHAAQNELLPLRLVVQVLFIEQARAAASGEKVTCMSSNIKALLEANGIDSSRLSSTTSIQHDDNSSVSGFKSTKNSSLKMKLAEEELDDENNNDVASNGIGRSSRFKSLGSLPNKPKRMFSKFWSTNRRRAEKN 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01854 605 Coils Coil 544 564 - -
Car07g01854 605 SUPERFAMILY POZ domain 22 114 IPR011333 -
Car07g01854 605 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Car07g01854 605 MobiDBLite consensus disorder prediction 555 605 - -
Car07g01854 605 Pfam NPH3 family 191 471 IPR027356 -
Car07g01854 605 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 602 - -
Car07g01854 605 PANTHER OS12G0117600 PROTEIN 1 602 IPR043454 -
Car07g01854 605 Gene3D Potassium Channel Kv1.1; Chain A 19 127 IPR011333 -
Car07g01854 605 MobiDBLite consensus disorder prediction 564 581 - -
Car07g01854 605 ProSiteProfiles NPH3 domain profile. 190 495 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01854 Car-Chr7 20637986 20640440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01854 26 500 EF-hand Containing Proteins AT3G44820 33.010 7.78e-78 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01854 - - cam:101491493 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01854 07 20637986 20640440 Car07g01854 07 20637986 20640440 ECH