Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01823 ATGCACTTTTCAACTATGGATTCAAATAGATTCTCCTTCTTAGAACCATTTCTCTCATCACACTACATAAGGAAACTTTTTTCTGCTTTCAGTTTATTTTTTGGAGCTTCTTTGCTTTTGTGTTCTCTTTTCTTTCTAACTAATTCCCTCAAAGTTCCTAAAGATTCAATCTTTCTTCCAATATTCAACACTTCTCACACAAATTCTTCTTTTCTTTCTTACCCTTTATTTTCTTTtaatactactactactactactaATCGTTCTTGTTTCTCTCAGAAGAACAATGTTTCTGAGAATTTCCTTAAGATAATTGAAGAACAAAGTGTTGTTGTCAAAAGAAAACATGATGGCATGAAGAATCATTCTAGTTTTATTACTAATGTGAGGAATGTGATTAAAAATGTGACCAATGATGTTTCATACAATGGAAATAGTAGTGTTATTGTTGAGGAATTGAATGAAGGGGGTTTGGTTTGGAATAAGAATGAAACTATAGTTACTCATAGTGATAACAAAATGGAGAAAATGAAGGTTGGTTTTTATGAAGATTGTGATATCTTTGATGGAAAGTGGGTGAGAGATTATTCAAAGCCATATTATCCTTTAGGTTCTTGTCCCTTCATTGATAGAGATTTTAATTGTCACCTTAATGGAAGGCTTGATCTTGAATATGTAAAATGGAAGTGGAAGCCAAATAAATGTCACATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGTTACGGGGACAGAGGCTGGTTTTTGTTGGAGATTCATTGAACAGAAACATGTGGGAGTCCCTAGTTTGTATCCTTCGTCAAAGCGTTGCAAACAAGAAACAAGTTTTTGAGATTTCGGGGAAAAGGGAATTTAAAAAGAAAGGTGTCTATGCTTTTAGATTTGAGGATTACAATTGTTCAGTGGATTTTGTTGCTTCACCATTCCTTGTTAGAGAATCAAGTTTCAAAGGCAAAAATGGTTCATTTGAGACATTAAGATTGGATTTGATGGACCACACAACTACAAGGTATCAGGATGCTAATATTATAGTCTTCAATACAGGCCATTGGTGGACACATGATAAAACTTCAAAAGGAGAAGATTATTATCAAGAAGGGAAGCATGTATATCCAAGACTCAAGGCTTTGGATGCATATATGAGGGCTTTGACCACTTGGGCTAAATGGGTTGACCATAAAATAAATTCCAATCAAACACAGATTTTCTTCAGAGGATACTCAGTTACTCATTTCTGGGGTGGACAATGGAATTCAGGAGGACAATGCCACAAAGAAACTGAACCAATATACAATGAAACTTACTTACAAAAGTATCCTTCGAAAATGCGGGCTGTAGAGCATGTCATCCAAAATATGAAAACCACAGTGATATATATGAACATAAGTAGACTTACAGATTACAGAAAAGATGGACATCCTTCGGTATACAGAAAAGATTATAAGACATCGATGAAGCAGAACGCTGCTTCGCTATACGAAGATTGCAGCCATTGGTGTTTGCCTGGAGTACCTGATACTTGGAATGAATTGCTGTATGTTTCTCTCTTAAAATATGGAAAGGGAACTTGGAAAATTTGA 1602 0.3452 MHFSTMDSNRFSFLEPFLSSHYIRKLFSAFSLFFGASLLLCSLFFLTNSLKVPKDSIFLPIFNTSHTNSSFLSYPLFSFNTTTTTTNRSCFSQKNNVSENFLKIIEEQSVVVKRKHDGMKNHSSFITNVRNVIKNVTNDVSYNGNSSVIVEELNEGGLVWNKNETIVTHSDNKMEKMKVGFYEDCDIFDGKWVRDYSKPYYPLGSCPFIDRDFNCHLNGRLDLEYVKWKWKPNKCHIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCILRQSVANKKQVFEISGKREFKKKGVYAFRFEDYNCSVDFVASPFLVRESSFKGKNGSFETLRLDLMDHTTTRYQDANIIVFNTGHWWTHDKTSKGEDYYQEGKHVYPRLKALDAYMRALTTWAKWVDHKINSNQTQIFFRGYSVTHFWGGQWNSGGQCHKETEPIYNETYLQKYPSKMRAVEHVIQNMKTTVIYMNISRLTDYRKDGHPSVYRKDYKTSMKQNAASLYEDCSHWCLPGVPDTWNELLYVSLLKYGKGTWKI 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01823 533 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 155 530 IPR029962 GO:0016413
Car07g01823 533 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 237 520 IPR026057 GO:0016740
Car07g01823 533 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 155 530 IPR029967 -
Car07g01823 533 Pfam PMR5 N terminal Domain 184 236 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01823 Car-Chr7 19373719 19376407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01823 - - gmx:100798751 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01823 07 19373719 19376407 Car07g01823 07 19373719 19376407 ECH
Car08g01062 08 10352429 10356134 Car07g01823 07 19373719 19376407 PCT