Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01821 ATGGTAATAGTAGCACTATCTTCTCCTTTACCAGGGAGAACTAACCTCTTTTCCTCCTTACCACCTCCCCACGACCCCACCTACtcctcatccgccaccccacgtccccccatccccatccccaaataccctccccccaaaaaatcccaaaccccaccaccacccaaccccGCCCTCAAATACCACCGTAACTCCAAATACTACAAACCAATTCAACAAAACGGCGTCCTCACATCCGACGGCGACCGCTCCGTTATCATCGGCGAATCCGGCGTCTCCTACCTTCTCCCCGGCGCTCCATTTGAGTTTCAGTTCAGTTACTCCGAGACTCCGAAAGTGAAGCCGCTGGCAATTCGCGAACCGGCTTTTCTCCCGTTCGAACCCCCTACGATGCCGAGGCCGTGGACCGGAAAAGCGCCGTTGAAGAAGTCGAAGAAGAATATTCCGCTTTTTGATTCGTTTAATCCTCCGCCTCCTGGTATGAAAGGAGTTAAGCAAGTTGAAATGCCGGGTCCTTTTCCGGTTGGGAAGTTTCCGGAAGAAGGAATGAGTAGAGAAGAGATACTTGGGGAGCCTCTTAAGAGGTGGGAGATTCAAATGCTTGTTAAGCCTATGACGTCTGATAATCGTCAGGTTAATCTCGGTCAGGATGGATTAACACATAACATGTTGGAGTTGATACATTCGCATTGGAAACGTCGCCGTGTCTGCAAAATTCGTTGTAAAGGTGTTCCCACTGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGGGGGAAAATAATTCATCGAGTTGGTGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTACCGTACTCGTCCACAGTATCCAGTGATGCTCTGGAAGCCAGCCGCTCCTGTTTATCCAAAACTTATACAAGATGCTCCAGGAGGATTAGCGAAAGCTGAAGCAGATGGATTACGGAAGAAAGGGAAAAGCATGTTGCCAATATGTAAATTAGCAAAAAATGGAGTATACACATCACTTGTAAAGGATGTCAGAGATGCTTTTGAAGGAAGTCCTTTGGTGAAGATCGACTGCAAGGGATTGGATCCTAGTGATTACAAGAAATTAGGTGCTAAGCTTAAGGATTTGGTTCCTTGTGTGCTATTGTCTTTTGATGATGAACAGATATTGATGTGGAGGGGCAAAGAGTGGAAATCAAAGTATGTGTTTGAAAGTCTTGTCCGAATGGAATTCTCCTACTGCAAGGTTGGAGATAATCAATCCAACCATATCGGCAACATCAGCCCAAAAATGTTATCTCTGTGGAAGAGTGCAATTGAGTCAAACAAAGCTTTATTGCTAGAAGAATTTAATCTTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGTGGGTATTTCACAGGCAACAGAGCACTCATACCCAGCATTTACTTCTTCAAGTGAAGTTGCTATTGAAGGTTCAATTGTAAATTTCGAAGATGGTACAGAAGACAAGTATTCAAATAACGACAGCCTAgaggattttgatgatgatgattatgataattacgatgtcgatgaaaatgacgagttgtatgatATAGTGGATACATCAGCTCGTCCGGGATCATTACCGGTTGATTTGCTTGTTGATAAGCTCAAACCGAGACGAAAAGAGTAA 1668 0.4035 MVIVALSSPLPGRTNLFSSLPPPHDPTYSSSATPRPPIPIPKYPPPKKSQTPPPPNPALKYHRNSKYYKPIQQNGVLTSDGDRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPGMKGVKQVEMPGPFPVGKFPEEGMSREEILGEPLKRWEIQMLVKPMTSDNRQVNLGQDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPGGLAKAEADGLRKKGKSMLPICKLAKNGVYTSLVKDVRDAFEGSPLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKEWKSKYVFESLVRMEFSYCKVGDNQSNHIGNISPKMLSLWKSAIESNKALLLEEFNLGPDALLEKVEEFVGISQATEHSYPAFTSSSEVAIEGSIVNFEDGTEDKYSNNDSLEDFDDDDYDNYDVDENDELYDIVDTSARPGSLPVDLLVDKLKPRRKE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01821 555 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 9 550 - -
Car07g01821 555 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 9 550 IPR044599 GO:0000373
Car07g01821 555 Gene3D - 311 409 IPR035920 -
Car07g01821 555 SMART CRS1_YhbY_2 311 394 IPR001890 GO:0003723
Car07g01821 555 SMART CRS1_YhbY_2 193 276 IPR001890 GO:0003723
Car07g01821 555 SUPERFAMILY YhbY-like 311 403 IPR035920 -
Car07g01821 555 Gene3D - 192 288 IPR035920 -
Car07g01821 555 ProSiteProfiles CRM domain profile. 309 405 IPR001890 GO:0003723
Car07g01821 555 MobiDBLite consensus disorder prediction 11 62 - -
Car07g01821 555 ProSiteProfiles CRM domain profile. 191 287 IPR001890 GO:0003723
Car07g01821 555 MobiDBLite consensus disorder prediction 11 26 - -
Car07g01821 555 MobiDBLite consensus disorder prediction 27 59 - -
Car07g01821 555 SUPERFAMILY YhbY-like 192 286 IPR035920 -
Car07g01821 555 Pfam CRS1 / YhbY (CRM) domain 313 394 IPR001890 GO:0003723
Car07g01821 555 Pfam CRS1 / YhbY (CRM) domain 197 276 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01821 Car-Chr7 19334887 19341496 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01821 - - gmx:100801953 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01821 07 19334887 19341496 Car07g01821 07 19334887 19341496 ECH