Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01311 GAACTGATTTTCTAGACCAAAGCTCAAAACTTCAGGACAGTTCATCAGATTCTCTCAAGCTTGATACCAAAAAGCAGAATGACGTTGTTCATTGGCACAACAGGGGGGTTGCCGCTCGACCATTACATTTATCAAGGGGAGTGGAGAAACCAAGTGGTAGGGTCACATACACAGTTGTTCTTGAAGGTTTATGCAGATTTAGTGTCCTGGAACTAAGCACAAGAGGAATATACCATACTGCAAGGATATCTTCCCTTGAGATGACTAAGACTGAAATGGAACAAATAGAGCAAGACCCAGATTACATAATGTTGTCTCGCCAATTCAAAGCAACAGCAATGGAGCTTATTTCTGTTTTGGAGCTGAAACAAAAAACCGGTGGAAGAACCAAAGTCCTTTTGGACAACGTTCCTGTTCACAAGTTGGCTGATATATTTGTTGCCAGTTTTGAGATAAGTTTTGAAGAACAACTGTCAATGTTGGACTCAGTTGGCCCTAAAATGAGGCTTTCAAAAGCAACCGAGTTAGTTGATAGGCATTTACAGTCAATACGTGTAGCTGAGAAAATTACCCAGAAGGTTGAAGGCCAATTGTCAAAATCTCAAAAAGAATTTCTTCTGCGTCAGCAGATGAGGGCTATAAAAGAAGAACTTGGTGATAGTGAGGATGATGAGGATGACCTTACAATCAGTTCATTTTGCTATAATTGTTTTCTCAGGAGGCTTAAAAAAATGCAGCCTCAGCAACCTGGGTATAACAGTTCGCGGGTTTACCTGGATCTTCTTGCTGATCTGCCCTGGCAGAAGGCCAGCGAAGAGATTGAACTGGACTTGAGAGCTGCACAAAATCGACTGGACAGTGATCACTATGGTTTAGTGAAGGTCAAACAACGGATAATTGAATACCTGGCAGTTCGCAAGCTTAAACCAGATGCAAGGGGTCCGGTGTTGTGCTTTGTTGGACCACCAGGTGTCGGTAAAACATCATTGGCATCTTCTATTGCTGCTGCTTTGGGCAGAAAATTTATCCGCATATCCCTTGGTGGAGTCAAGGATGAGGCCGATATTAGAGGACATAGGAGAACATATGTTGGAAGCATGCCTGGACGGCTTATAGACGGCTTAAAGAGAGTAGCTGTTTGCAATCCGGTTATGTTGCTTGATGAAGTTGACAAGACAGGTTCTGATGTTCGTGGAGATCCAGCTTCAGCATTGCTAGAGGTTCTTGATCCAGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATTTGATCTATCAAAGATAGTTTTTGTGGCTACAGCAAATAGGATGCAGCCTATTCCTCCAGCGCTTCTGGATAGGATGGAAGTGATCGAGCTCCCGGGATATACACCTGAGGAAAAACTTCAAATAGCCTTGAAGCATTTGATTCCAAGAGTTTTGGACCAACATGGATTGAGTTCTGAGTTTATTCAGATTCCTGAGGCAATGGTGAAAATTGTCATTCAGAGATATACTAGGGAAGCTGGTGTGCGGAATTTGGAGAGGAATCTTGCTGCCCTGGCTCGTGCTGCTGCAGTAAGAGTTGTAGAGCAAGAACAAGTGGTTCCATTAAACAAAGGGGTGCAAGGACTTTCTACCCCACTTCTGGAAAATAGACTTGCTGATGGCACTGAAGTTGAAATGGATGTGATACCAATGGGTGTAAATAGTCAGGAAATCTCACACACATTCAGGATTGCCTCTCCATTGGTTGTTGATGAAACCATGCTTGAAAAAGTTCTTGGGCCTCCAAGGTTTGATGATAGAGAAGCTGCAGAGCGTGTGGCTTCCCCTGGGGTCTGTGTTGGGCTTGTTTGGACTGCTTTTGGCGGAGAAGTTCAGTTTGTGGAGGCTACAGCAATGGTAGGGAAGGGTGAACTGCATCTCACTGGACAACTTGGTGATGTAATCAAAGAATCAGCTCAGATAGCACTAACATGGGTAAGGGCAAGGGCGACTGATCTTAGGCTGGCTGCTGCAATGGGATTTAATCTTTTGGAGGGGCGTGATGTACATATTCATTTTCCTGCGGGTGCTGTTCCTAAAGATGGGCCCTCGGCAGGTGTGACTTTAGTCACATCATTGGTTTCCCTTTTCACTCAGAAAAGTGTGAGATCAGATACAGCTATGACCGGAGAGATGACATTGCGGGGACTAGTTCTACCTGTTGGTGGTGTCAAGGATAAGGTATTAGCTGCCCATCGTTATGGTATCAAGAGAGTTATCCTGCCTGAAAGGAACCTGAAAGACTTGGTTGAAGTACCATCATCAGTGCTTGCCAATTTGGAGATACTGGTTGCAAAACGAATGGAAGATGTGTTAGAGCATGCTTTTGACGTACCATGGACTCTGAATGTTGTTTGTTGTGATATTGGGGAACTGGAGCAAGTATATTCAACTGACCGTATTAATCAGGAGCAAAGCCCAAGAAATTGA 2465 0.4373 TDFLDQSSKLQDSSSDSLKLDTKKQNDVVHWHNRGVAARPLHLSRGVEKPSGRVTYTVVLEGLCRFSVLELSTRGIYHTARISSLEMTKTEMEQIEQDPDYIMLSRQFKATAMELISVLELKQKTGGRTKVLLDNVPVHKLADIFVASFEISFEEQLSMLDSVGPKMRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDSEDDEDDLTISSFCYNCFLRRLKKMQPQQPGYNSSRVYLDLLADLPWQKASEEIELDLRAAQNRLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFIRISLGGVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKIVFVATANRMQPIPPALLDRMEVIELPGYTPEEKLQIALKHLIPRVLDQHGLSSEFIQIPEAMVKIVIQRYTREAGVRNLERNLAALARAAAVRVVEQEQVVPLNKGVQGLSTPLLENRLADGTEVEMDVIPMGVNSQEISHTFRIASPLVVDETMLEKVLGPPRFDDREAAERVASPGVCVGLVWTAFGGEVQFVEATAMVGKGELHLTGQLGDVIKESAQIALTWVRARATDLRLAAAMGFNLLEGRDVHIHFPAGAVPKDGPSAGVTLVTSLVSLFTQKSVRSDTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLVEVPSSVLANLEILVAKRMEDVLEHAFDVPWTLNVVCCDIGELEQVYSTDRINQEQSPRN 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01311 820 PIRSF Lon_proteas 5 541 IPR004815 GO:0004176|GO:0005524|GO:0006508
Car07g01311 820 PIRSF Lon_proteas 566 790 IPR004815 GO:0004176|GO:0005524|GO:0006508
Car07g01311 820 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 9 791 - -
Car07g01311 820 TIGRFAM lon: endopeptidase La 17 787 IPR004815 GO:0004176|GO:0005524|GO:0006508
Car07g01311 820 CDD AAA 297 458 - -
Car07g01311 820 ProSiteProfiles Lon N-terminal domain profile. 1 178 IPR003111 -
Car07g01311 820 MobiDBLite consensus disorder prediction 1 21 - -
Car07g01311 820 Gene3D - 277 455 IPR027417 -
Car07g01311 820 SMART lon_5 10 178 IPR003111 -
Car07g01311 820 SMART AAA_5 312 457 IPR003593 -
Car07g01311 820 MobiDBLite consensus disorder prediction 1 15 - -
Car07g01311 820 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 1 796 IPR027501 GO:0004252|GO:0006515
Car07g01311 820 ProSiteProfiles Lon proteolytic domain profile. 604 789 IPR008269 GO:0004176|GO:0004252|GO:0006508
Car07g01311 820 SUPERFAMILY Ribosomal protein S5 domain 2-like 607 787 IPR020568 -
Car07g01311 820 Gene3D - 85 221 - -
Car07g01311 820 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 607 623 - -
Car07g01311 820 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 320 339 - -
Car07g01311 820 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 719 738 - -
Car07g01311 820 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 689 708 - -
Car07g01311 820 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 742 760 - -
Car07g01311 820 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 9 791 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Car07g01311 820 Pfam ATP-dependent protease La (LON) substrate-binding domain 31 178 IPR003111 -
Car07g01311 820 Pfam ATPase family associated with various cellular activities (AAA) 316 453 IPR003959 GO:0005524|GO:0016887
Car07g01311 820 Pfam Lon protease (S16) C-terminal proteolytic domain 581 787 IPR008269 GO:0004176|GO:0004252|GO:0006508
Car07g01311 820 Gene3D - 606 790 IPR014721 -
Car07g01311 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 264 530 IPR027417 -
Car07g01311 820 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 692 700 IPR008268 GO:0004176|GO:0004252|GO:0006508
Car07g01311 820 Gene3D - 456 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01311 Car-Chr7 12060527 12074238 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01311 K01338 - gmx:100789982 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01311 07 12060527 12074238 Car07g01311 07 12060527 12074238 ECH