Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01306 ATGCTATGCACCAACAACAACCATGGAATTACTACTAATTCTCGCAAGAGGGATAGAGAAGGAACAGAAACAGGACACACTACATCCCCTAATGTTAATGCTATGAATCATTTCTCTTTGCAATCTCAACCTTCACATTTTATACATCTTTCACACCTCCATAATCAACAACAAAATGTAGTCTCAACTGGCCTTCGCTTATCATTCGATGATCAAAGGTTACAATTTCAACAACAAACTTCTCAATCCTCCTCTACTTTCTTATCTCTATTATCACAAGGAATCAATTCTCAAATCAAACAACAACAACATGAATTAGACCAATTCCTTCAAAGCCAGGGAGAGAATGTACGGCGGAGTTTGGCGGAGAAGAGGCAGAGGCATTATCGAGAACTACTAAAAGCGGCAGAAGAAACGGTGGAGCAGCGTCTAAAGGAGAAAGAAACAGAGTTTGCAAAAGCTACGTGCAAGAACGCGGAATTAGAAGCGCGTGCAGCACAACTAACGATGGAGGCCCAAGTATGGCAGGCGAGAGCCCGGGCCCATGAGGCAGCAGCGGCTTCTATTCAGGCCGAACTGCAAAAGACAATAATGTGTCAAACAAACGAGGACGGCGGCGGCGTTATTTCGTCAACCGGACAGGCTGAGGATGCGGAATCGGCTTATATCGATCCGGATAGAGTTGCTATGATTTCAGCACCGCGTCCCAAATGTAGAGGATGTGGGAAGCGTGTACCTTCGGTGGTTGTTTTGCCTTGTCGTCACTTGTGTATTTGTACAGAATGTGATCACCATTTTAGAGCTTGCCCTGTTTGCCTTACTCTCAAGAATTCTACAGTTCACATTTTTCTCTCCTAA 858 0.4441 MLCTNNNHGITTNSRKRDREGTETGHTTSPNVNAMNHFSLQSQPSHFIHLSHLHNQQQNVVSTGLRLSFDDQRLQFQQQTSQSSSTFLSLLSQGINSQIKQQQHELDQFLQSQGENVRRSLAEKRQRHYRELLKAAEETVEQRLKEKETEFAKATCKNAELEARAAQLTMEAQVWQARARAHEAAAASIQAELQKTIMCQTNEDGGGVISSTGQAEDAESAYIDPDRVAMISAPRPKCRGCGKRVPSVVVLPCRHLCICTECDHHFRACPVCLTLKNSTVHIFLS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01306 285 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 7 81 - -
Car07g01306 285 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 79 284 - -
Car07g01306 285 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 218 285 IPR013083 -
Car07g01306 285 ProSiteProfiles Zinc finger RING-type profile. 238 272 IPR001841 -
Car07g01306 285 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 7 81 IPR017066 -
Car07g01306 285 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 79 284 IPR017066 -
Car07g01306 285 Pfam Zinc finger, C3HC4 type (RING finger) 237 273 - -
Car07g01306 285 Coils Coil 130 178 - -
Car07g01306 285 MobiDBLite consensus disorder prediction 1 33 - -
Car07g01306 285 PIRSF SBP1_RNase_bind 2 285 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01306 Car-Chr7 11974593 11976133 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01306 K19042 - gmx:100788924 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00352 08 2770165 2773632 Car07g01306 07 11974593 11976133 PCT