Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01298 ATGTACAAAGAACGAGGTGTTTCTGCCTCCAAATCGGAGGATCGGAAGCGAATCAACGACGTTCTCGACAAACAGCTCGAACGATCCTCTCCTTCAACTTCTCGTCCAATCAATGGAAAACACAACAAAGACAGAGAAAACAGCAACATCATCAAGGACCCTCGTTCCGCTTCCGTTTCAAAAACTTCCAACATCTCTGAGGAATCTGAAACTGACAGTGAAGAGTCTGATGTTAGTGGTTCTGATGGAGATGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGCGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTCTGTGGATTAAGCAGTCAAGTGCCGTACTAtgattatgctcttgatttgattttggatgttgaGTCATCCCATGAGGAACAAAACGAGTTAATCGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCCCGATACATTCTGACAACCAAAGGAATGGCTGCCATGCTCGACAAGTACAAGAACTATGATTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGCCTTCCAGTTGGCCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGTCCTAGGTGTGAAGATCTCTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCCCATCTCTTCTTGATGACATATGGACAACTGAAGCCACAGAAACCATCTCAGGGCTACGTTCCAAGAGTTTTTGGGTTCAAAATTAACAAACCATGA 810 0.4185 MYKERGVSASKSEDRKRINDVLDKQLERSSPSTSRPINGKHNKDRENSNIIKDPRSASVSKTSNISEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHEEQNELIESAAEMLYGMIHARYILTTKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQGYVPRVFGFKINKP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01298 269 MobiDBLite consensus disorder prediction 1 24 - -
Car07g01298 269 MobiDBLite consensus disorder prediction 1 83 - -
Car07g01298 269 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 80 179 IPR016149 GO:0005956|GO:0019887
Car07g01298 269 SUPERFAMILY Casein kinase II beta subunit 85 268 IPR035991 GO:0005956|GO:0019887
Car07g01298 269 Pfam Casein kinase II regulatory subunit 87 265 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 SMART CK_II_beta_2 87 265 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 Gene3D - 180 254 - -
Car07g01298 269 PANTHER CASEIN KINASE II SUBUNIT BETA 1 268 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 PANTHER CASEIN KINASE II SUBUNIT BETA-2 1 268 - -
Car07g01298 269 ProSitePatterns Casein kinase II regulatory subunit signature. 183 214 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 MobiDBLite consensus disorder prediction 52 66 - -
Car07g01298 269 PRINTS Casein kinase II regulatory subunit family signature 87 103 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 PRINTS Casein kinase II regulatory subunit family signature 104 118 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 PRINTS Casein kinase II regulatory subunit family signature 154 175 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 PRINTS Casein kinase II regulatory subunit family signature 179 200 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 PRINTS Casein kinase II regulatory subunit family signature 201 222 IPR000704 GO:0005956|GO:0019887
Car07g01298 269 PRINTS Casein kinase II regulatory subunit family signature 229 246 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01298 Car-Chr7 11888505 11891773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01298 K03115 - gmx:100780095 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01298 07 11888505 11891773 Car07g01298 07 11888505 11891773 ECH
Car08g00348 08 2724983 2728177 Car07g01298 07 11888505 11891773 PCT