Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01296 ATGGTGCTTCCTTTTGCCAAATACATTCTATCACAAAACCCCTTTGTCAAAAAAAATTCTCATTTACAATTCATTCTTCAAGGACATGTCTTCTTCCACCAATTGAATTCATTTTCGCAAAAAATTTCAACTTCCAGCCACTGTGAGAGATTATCATGGGAACGTTCCACCGAACAAATTCTATTGAGTAAGCTTAAACTTGCTTTAAGGAATCATCAATTGCAAGAAGCATTGGAAACATTTCATGATTTTAGAACCCTTTATGGTTACCCTGAAGTTAATTTATTGAACCAGTTTATTGTTCAGTTGTGTTATTCTTCCAATCATGTTTGGGTTAGAAAGTCATCTGATTTAGCTTTGAAAATTGTTGAAGAGAAATCATGTTTGCTTCATGTTGATACATTAACAAAACTTGCACTTTCTCTTGCTAGAATGCAAATGCCATCACCTGCTTCTGTTATACTCAGGTTAATGCTTAACAAAGGGTGTGTGCCAAGTATGCATTTATTGTCCTTGATTGTTTTTCATATTGTGAACACGGATATTGGAACGCATCTTGCATCTAATTATTTGTCTCAAGTTTGTGATTTTTATAATTGCTTGGATGATAAAAAGGCTCATCATGCAATTTTGTTGAAGCCGGATACTTTGGTATTTAACCTTGTTCTTGATGCTTGTGTGAGGTTTAAGTTGTCTTTGAAAGGTTTGTGTTTGATTGAGTTAATGGCACTGACCGGGATAGTGGCTGATGCACACTCGATTGTGATAATTTCGCAGATCTTAGAGATGAATGGTCTGGGAGATGAAATGATGGAATTGAAATGTCATATTGATGGAGTTTCGGCTTCTTATGTTCGGCATTATCGTCTGTTCTATGATAGTTTGTTGAGTTTGCACTTCAAATTTAATGATATAGATGCTGCAGTTAAGCTTGTTTTGGATATGAATAGCTCACACAATCGTCACAATAATAAAGAATATAAGAATCACTTACAATTACAAAAGCCTTGCTTTATTGCTATTGGATCGTCTAACCTTAAGGATGCTTTAAAGATACATATAGAACCTGAGTTACTGCAGAAGGACTCTGTGCTTAAAGTGGAAGGTAGAGAAGTTCTTGTTTTTTATAGGGGTGGGAAACTTGTTCTTAGTAACAGAGCTCTGGCTAAGTTTATCATTGGTTACAAGAAAGACAGTAGAATTAGTGAACTTTCGAAACTTTTACTTAGCATTCAAGGGGAACAATATTCAGTGGCAGGATCCAGTTTATGTTCTGATGTGATCAGTGCTTGCATTCAGATGGGATGGCTTGAGTCTGCTCATGACATTTTGGACGATGTAGCGGCTGCTGGGTCTCCAATGGGCTGCGATACATATACGTTACTCTTGTCGGCATATCAGAAGGGGGGAATGCAAAGAGAATCTAAGGCACTGCTAAAACAAATGAAAAAGATTAATTTGCACAAAGATTTGTGTAATGATGCTTTTGACAAAAACACCCTTTGTGAAGAAACATCAAATTCAGTTGGTAAATCAGATTTGGCTGTCGCCTTGGCTCAAATTTCGAAAGATGAAAATCAAACAGTTATTCCTTTGGTGTATAACTTCAACTCTTCTATATTCTTTTTCTGCAAGGCAAGGATGATAGAGGATGCACTGAGGGCATATAGAAGAATGTGCGAAATGAAAATCCAACCGACAAGTCAAACTTTTGCTCATCTTGTGCGTGGATATTCTTCTCTTGGTATGTATCGTGAAATTACATTCTTGTGGGGAGACATCAAGAGATTGATGAAGAACAACAATTTTGTTGTAAATAGAGATCTAGGTGAGTTAGTGCTGCTAAACTTCATTCGAGGTGGTTACTTTGAGAGAGTGATGGAGGTAATTGGGCATATGAGAGACCGTAACATGTACACTGATAAGTCGATGTACAAAAGCGAGTTCCTTAGGCTTCATAAGAATCTTTATAGGAGTTTAAAAGCATCAGATACAAGAACTGAAGCACAGAGCAAAAGGCTTGAGCATGTAAAAGAATTTTTGAAATGGGCTGGTATAGATGAAATGTCTCGTAAATAA 2079 0.366 MVLPFAKYILSQNPFVKKNSHLQFILQGHVFFHQLNSFSQKISTSSHCERLSWERSTEQILLSKLKLALRNHQLQEALETFHDFRTLYGYPEVNLLNQFIVQLCYSSNHVWVRKSSDLALKIVEEKSCLLHVDTLTKLALSLARMQMPSPASVILRLMLNKGCVPSMHLLSLIVFHIVNTDIGTHLASNYLSQVCDFYNCLDDKKAHHAILLKPDTLVFNLVLDACVRFKLSLKGLCLIELMALTGIVADAHSIVIISQILEMNGLGDEMMELKCHIDGVSASYVRHYRLFYDSLLSLHFKFNDIDAAVKLVLDMNSSHNRHNNKEYKNHLQLQKPCFIAIGSSNLKDALKIHIEPELLQKDSVLKVEGREVLVFYRGGKLVLSNRALAKFIIGYKKDSRISELSKLLLSIQGEQYSVAGSSLCSDVISACIQMGWLESAHDILDDVAAAGSPMGCDTYTLLLSAYQKGGMQRESKALLKQMKKINLHKDLCNDAFDKNTLCEETSNSVGKSDLAVALAQISKDENQTVIPLVYNFNSSIFFFCKARMIEDALRAYRRMCEMKIQPTSQTFAHLVRGYSSLGMYREITFLWGDIKRLMKNNNFVVNRDLGELVLLNFIRGGYFERVMEVIGHMRDRNMYTDKSMYKSEFLRLHKNLYRSLKASDTRTEAQSKRLEHVKEFLKWAGIDEMSRK 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01296 692 PANTHER OS07G0495300 PROTEIN 25 687 - -
Car07g01296 692 Gene3D Tetratricopeptide repeat domain 377 496 IPR011990 GO:0005515
Car07g01296 692 PANTHER BNAC05G43320D PROTEIN 25 687 - -
Car07g01296 692 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 532 566 IPR002885 -
Car07g01296 692 TIGRFAM PPR: pentatricopeptide repeat domain 543 567 IPR002885 -
Car07g01296 692 Pfam PPR repeat 458 486 IPR002885 -
Car07g01296 692 Pfam PPR repeat 542 563 IPR002885 -
Car07g01296 692 Gene3D Tetratricopeptide repeat domain 497 690 IPR011990 GO:0005515
Car07g01296 692 Gene3D Tetratricopeptide repeat domain 56 340 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01296 Car-Chr7 11873092 11875170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01296 204 645 Glycosyltransferase AT1G05670 22.642 7.47e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01296 - - cam:101501642 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01296 07 11873092 11875170 Car07g01296 07 11873092 11875170 ECH