Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01273 ATGGCTTCTCCTACTCCGAAAAGATGGCTTCCTCTTGAAGCTAACCCTGATGTCATGAACCAGTTTCTTTTTGGTCTTGGTCTTCCTGAGGATCAAGCTGAGTGCAATGATGTATACGGATTAGATGATGAGCTTTTGGAAATGGTTCCAAAGCCTGTTCTTGCTGTGCTTTTTCTTTATCCCCTTACCACCAAGAGTGAAGAAGAGAGGTTGCGACAGATAAATGAAAAAAGGGAATATAGCAACAAAGTGTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAATAGGACTTCTTCATGCTCTCGGTAACATAACTTCTGAAATCAAGTTTGTTGAGGGTTCATTCTTTGATAAGTTTTTCAAATCTACCGCAAACTTGGACCCAATGCAGCGTGCTTTGTTTCTTGAGAATGATACTGAGATGGAGGTTGCTCATTCTGTAGCAGCCACTGCTGGTGATACAGAGGCATCAGACAATGTGGATACTCATTTCATCTGCTTTGCTTGTGTGGATGGTGAACTTTATGAGCTTGATGGAAGAAAGTCAGGAGCAATATCTCATGGTCCATCCTCACCAAGTACTTTGTTGAAGGATGCAGCTAAAGCCATCCAGAGCATGATCCAGAAGAATCCAGATTCCCTCAACTTCAATGTCATTGCATTATCAAAGAAATCCCAGTGA 690 0.4159 MASPTPKRWLPLEANPDVMNQFLFGLGLPEDQAECNDVYGLDDELLEMVPKPVLAVLFLYPLTTKSEEERLRQINEKREYSNKVYFMKQTVGNACGTIGLLHALGNITSEIKFVEGSFFDKFFKSTANLDPMQRALFLENDTEMEVAHSVAATAGDTEASDNVDTHFICFACVDGELYELDGRKSGAISHGPSSPSTLLKDAAKAIQSMIQKNPDSLNFNVIALSKKSQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01273 229 SUPERFAMILY Cysteine proteinases 7 226 IPR038765 -
Car07g01273 229 Gene3D - 4 227 IPR036959 GO:0004843|GO:0006511
Car07g01273 229 CDD Peptidase_C12_UCH_L1_L3 9 224 - -
Car07g01273 229 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 228 IPR001578 GO:0004843|GO:0006511
Car07g01273 229 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 11 28 IPR001578 GO:0004843|GO:0006511
Car07g01273 229 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 49 61 IPR001578 GO:0004843|GO:0006511
Car07g01273 229 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 89 106 IPR001578 GO:0004843|GO:0006511
Car07g01273 229 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 161 172 IPR001578 GO:0004843|GO:0006511
Car07g01273 229 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 177 187 IPR001578 GO:0004843|GO:0006511
Car07g01273 229 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4 228 - -
Car07g01273 229 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 9 210 IPR001578 GO:0004843|GO:0006511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01273 K05609 - gmx:100527718 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01273 07 11603001 11606638 Car07g01273 07 11603001 11606638 ECH