Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01227 ATGTCATCAAAATCAAAAGTTAAAGCTATGTTGTTGATCTTTAAGATAATGACGTTGAATGTAATGACACATGCATGTGGCCCATGCACTCCACCTTACCACAACCGACCAACCCATCCGAAACATCCAAAAGTATCTCCTCCAGTGGTGATCGTGCCGCCGATTATCATCACTCCACCATTACAACCACCTCCGACGATCATATATCCTCCTCCGGCTCCGATCAATGAACGAAGTTGTCCAATCGATGCATTGAAGCTTGGAGTTTGTTTGGATGTCCTTGGAGGAGTTGTACACGTGGGAATAGGGAACCCTGTTGAGAGTGTGTGTTGTCCTGTTATTGAAGGGTTGGTTGATCTTGAAGCTGCAATTTGTCTTTGCACTGTTATTAGGGCTAAGCTTCTTAATCTTAATATTTTCCTTCCTCTTGCTCTTCAACTTTTGATAACTTGTGGGAAGAATCCTCCTCCTGGCTTTCTTTGTCCACCTCTCTAA 495 0.4343 MSSKSKVKAMLLIFKIMTLNVMTHACGPCTPPYHNRPTHPKHPKVSPPVVIVPPIIITPPLQPPPTIIYPPPAPINERSCPIDALKLGVCLDVLGGVVHVGIGNPVESVCCPVIEGLVDLEAAICLCTVIRAKLLNLNIFLPLALQLLITCGKNPPPGFLCPPL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01227 164 CDD HPS_like 79 161 IPR027923 -
Car07g01227 164 PANTHER - 5 163 - -
Car07g01227 164 Pfam Hydrophobic seed protein 80 162 IPR027923 -
Car07g01227 164 Gene3D - 79 163 IPR036312 -
Car07g01227 164 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 82 163 IPR036312 -
Car07g01227 164 SMART aai_6 80 161 IPR016140 -
Car07g01227 164 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01227 Car-Chr7 11142501 11143463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01227 72 163 Acyl Lipid Metabolism Gene Families AT4G22490 36.559 8.68e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01227 - - cam:101496757 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01227 07 11142501 11143463 Car07g01227 07 11142501 11143463 ECH