Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01226 ATGGCTTCCAAAACTTGTTCCACACTTGCTCTTTTCTTCACACTCAACCTCCTCTTCTTTTCACTTGTTTCAGCTTCTGGATCTTGTTCATGCaacccaaatccaaacccaaacccaaagcccagcccaactccaaagccaaagccaaacccaaacccaaagcccaacccaagtccaaaacccaacccaagtccaaaaccaaccccTTCAAGTGGCTCATGTCCCAGTGATACACTAAAACTTGGTGTATGTGCCAATGTCCTAAATGGGTTACTAAATATAAAATTGGGTCAACCACCGGTGGCCCCTTGTTGCTCACTTCTAGAAGGCCTAACTGATCTTCAGGCTGCAGCCTGTCTTTGCACTGCCCTTAAAGCTAACATTTTGGGCATCAATCTTAACCTTCCCATTTCACTTAGCTTGCTTCTTAATGTTTGCTCAAAGAAAGTCCCACGTGATTTCCAATGTGCCTAA 474 0.327 MASKTCSTLALFFTLNLLFFSLVSASGSCSCNPNPNPNPKPSPTPKPKPNPNPKPNPSPKPNPSPKPTPSSGSCPSDTLKLGVCANVLNGLLNIKLGQPPVAPCCSLLEGLTDLQAAACLCTALKANILGINLNLPISLSLLLNVCSKKVPRDFQCA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01226 157 PANTHER - 1 157 - -
Car07g01226 157 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Car07g01226 157 MobiDBLite consensus disorder prediction 33 75 - -
Car07g01226 157 CDD HPS_like 72 156 IPR027923 -
Car07g01226 157 MobiDBLite consensus disorder prediction 34 70 - -
Car07g01226 157 Gene3D - 72 157 IPR036312 -
Car07g01226 157 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 77 156 IPR036312 -
Car07g01226 157 SMART aai_6 74 156 IPR016140 -
Car07g01226 157 Pfam Hydrophobic seed protein 74 157 IPR027923 -
Car07g01226 157 PANTHER LIPID TRANSFER PROTEIN EARLI 1-RELATED 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01226 Car-Chr7 11137364 11138357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01226 64 156 Acyl Lipid Metabolism Gene Families AT4G22490 41.053 2.65e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01226 - - gmx:100801985 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01226 07 11137364 11138357 Car07g01226 07 11137364 11138357 ECH