Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01224 ATGACTTCCAAAACCGTTTCCTCCCTTGCTCTTTTCCTCACATTCAACATTCTCTTCTTTACACTTGTCTCTTCTTGTGGAACTTGTGGTCCAAATTacccaagcccaaacccaaagcacaagccaaagcataagccaagcccaaacccTTCCGGCGGCTCGAGTCCCTCAGGTGGCTCGAGTCCCTCCGGAGGCTCGAGTCCTTATGGTGGCTCGAGTCCTTCTGGTGGCGGCACGGTTACCACGTGCCCACGTGACGCACTAAAACTTGGGGTATGTGCCAATGTCCTAAATGGATTGTTGAATGTAACTTTAGGTCAACCACCAGTTACCCCTTGTTGCTCACTCTTACAAGGCCTAGTTGATCTAGAGGCTGCAGTTTGTCTTTGCACTGCCCTTAAAGCTAACATTTTAGGGATAAATCTCAACCTTCCTATCTCACTTAGCTTGCTTCTCAATGTTTGTTCAAGACAAGCTCCACGTGACTTCCAATGCCCTTAA 501 0.4271 MTSKTVSSLALFLTFNILFFTLVSSCGTCGPNYPSPNPKHKPKHKPSPNPSGGSSPSGGSSPSGGSSPYGGSSPSGGGTVTTCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLQGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSRQAPRDFQCP 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01224 166 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Car07g01224 166 CDD HPS_like 80 165 IPR027923 -
Car07g01224 166 PANTHER - 7 52 - -
Car07g01224 166 PANTHER - 65 166 - -
Car07g01224 166 Gene3D - 80 166 IPR036312 -
Car07g01224 166 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 65 166 - -
Car07g01224 166 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 52 - -
Car07g01224 166 SMART aai_6 83 165 IPR016140 -
Car07g01224 166 MobiDBLite consensus disorder prediction 35 78 - -
Car07g01224 166 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 166 IPR036312 -
Car07g01224 166 MobiDBLite consensus disorder prediction 48 78 - -
Car07g01224 166 Pfam Hydrophobic seed protein 82 166 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01224 Car-Chr7 11120482 11121505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g01224 72 166 Acyl Lipid Metabolism Gene Families AT4G22490 38.947 5.30e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01224 - - gmx:100798361 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01224 07 11120482 11121505 Car07g01224 07 11120482 11121505 ECH