Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g01222 ATGCGAGTGAAGGAAATGCACCCGTTGTGCTGCATCTCTCTGGAGAGTCCTGGGATCGGAAGTCAATCGCCGGAGCCAGACGCGGCGGCGCTTTCGAGGACGAGGAGTCTACCGGCGAGTGGATCTGGCCGCATTGGACGCCGTGGATCAGAGGCTACGGTTGCCGGAGTTCTTTACAAATGGACTAATTACGGCAAGGGATGGAGATCCCGGTGGTTTCTCCTCCGCAATGGCGTACTCTCTTACGCCAAGATCCGGTCGCCGGAGAATCTAAATCTGTTCTCTCCAATCGATGACGTTTGCCTCATCGGAGATGTAACCGCTAACCGTCTCGCTAGAATGGATAGGGACGCCGGAAACGCCATGCGCCGGAAAAGTCACAAACCTTCTTCCTCTTCCTCTTCTCCTCCTACAGTTGTTCATCTAAAGATCTCGTCTTTTAGAGAGAGCAAATCAGACGACAGAAAGTTCTATATATTTACAGCAACGAAGACACTCCATCTGAGAACCGATTCAAGGAAAGATCGTGTGGCGTGGATTCAAGCTTTGGTGACAACTCGTAGTTTGTATCCACTAAGCGGTCATCTATCACTTGCACCTTATCATATATCTGTGTCTACTGAGAGGCTTAAACGACGTTTGCTTGAAGAAGGTAGCAGTGAGAATCTTGTAAAGGAGTGTGAGCAAATCATGCTCGCAGAGTTTTCTGAATTACAAGAGCAGCTTAAAATTCTTTGTCAAGAACGATCCAATTTGTTTGATACGATTAGGCAGTTGGAGGCAGCTAACATTGAACCTGAAGCCTCTGCCTTGCATGACAGTGAATACCAATTAACAAAGAATGGATTTTCAAGTCTAGGGCGTGGAAAATATAGTGAATGCAGTACAACGGAATCATCTGATGATATCGAGAAACaagaggtagaggaagtgtcagaagaagatgaaATCTCATATTATGATACTAGAGACTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAAAAGGAACTCTGGATCAAGTGAACATGTCTGGGGAAGCTACTAGACAGTGCATTGATATGGAAAACAGTCGTGATCAGACAATGGTATATGATTATGGTTATCCTCAGATAGCAAGGCGAAAAAAACTTCCAGATCCTGTTGAGAAGGAGAAGGGCGTTAGTCTTTGGTCCATGATCAAAGACAATGTAGGCAAAGATCTCACACGTGTTTGCCTTCCTGTATACTTTAATGAGCCGATATCATCCCTTCAAAAATGTTTTGAGGATTTGGAGTACTCTTATCTTCTGGATAGAGCTTATGAGTATGGAAAATCGGGAAACAGTCTCCTTCGGGCACTAAACGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCCGAAGGTCGTCATTGTAAGCCATTTAATCCCTTGTTAGGAGAAACTTACGAGGCGGATTTTCCTGACAAAGGAGTCCGATTCTTTTCTGAGAAGGTTAGTCACCATCCAACCGTGGTTGCCTGCCATTGTGAAGGTCGAGGATGGAGGTTTTGGGCAGACAGTAACATTCGTTCAAAGTTTTGGGGAAGGTCAATTCAGCTGGACCCAGTTGGAGTTCTGACTCTGGAATTTGATGATGGTGAAATATTCCAGTGGAGCAAGGTTACGACTACAATTTATAATCTTATCCTTGGAAAAATATATTGTGATCATCATGGGAGTATGGAAATCCGTGGTAATCGTCAATATTCATGCAGGCTCAAGTTCAAAGAGCAGACAATTCTTGACCGAAATCCTCGCCAGGTGCATGGATTTGTTGAAGATACAATGGGTAAAAAAGCTGCTACATTATTTGGCAAGTGGGATGATAGTATTAATTATTTTGGTGGTGATGTGAATGTGAAGCCTAAAGATTTCACTAATTCGTCAAGTGGAACCTTGTTGTGGAAAAGGACTAAGCCACCACCGAATCTCACTCGGTACAATTTGACATCATTTGCCATCACACTGAATGAGCTTACCCCAGGACTAAAGCCTTTTCTGATGTATTTGATCACGGATTAA 2046 0.4335 MRVKEMHPLCCISLESPGIGSQSPEPDAAALSRTRSLPASGSGRIGRRGSEATVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRSPENLNLFSPIDDVCLIGDVTANRLARMDRDAGNAMRRKSHKPSSSSSSPPTVVHLKISSFRESKSDDRKFYIFTATKTLHLRTDSRKDRVAWIQALVTTRSLYPLSGHLSLAPYHISVSTERLKRRLLEEGSSENLVKECEQIMLAEFSELQEQLKILCQERSNLFDTIRQLEAANIEPEASALHDSEYQLTKNGFSSLGRGKYSECSTTESSDDIEKQEVEEVSEEDEISYYDTRDYFTEPGFRCGSKGTLDQVNMSGEATRQCIDMENSRDQTMVYDYGYPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPDKGVRFFSEKVSHHPTVVACHCEGRGWRFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGSMEIRGNRQYSCRLKFKEQTILDRNPRQVHGFVEDTMGKKAATLFGKWDDSINYFGGDVNVKPKDFTNSSSGTLLWKRTKPPPNLTRYNLTSFAITLNELTPGLKPFLMYLITD 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g01222 681 Pfam Oxysterol-binding protein 389 672 IPR000648 GO:0008289
Car07g01222 681 Gene3D - 48 189 IPR011993 -
Car07g01222 681 MobiDBLite consensus disorder prediction 17 47 - -
Car07g01222 681 Gene3D - 475 649 - -
Car07g01222 681 SMART PH_update 52 190 IPR001849 -
Car07g01222 681 Pfam Pleckstrin homology domain 56 183 - -
Car07g01222 681 ProSiteProfiles PH domain profile. 51 188 IPR001849 -
Car07g01222 681 SUPERFAMILY PH domain-like 51 185 - -
Car07g01222 681 PANTHER BNAC03G64980D PROTEIN 131 340 - -
Car07g01222 681 PANTHER BNAC03G64980D PROTEIN 367 675 - -
Car07g01222 681 PANTHER BNAC03G64980D PROTEIN 4 115 - -
Car07g01222 681 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 115 IPR000648 GO:0008289
Car07g01222 681 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 367 675 IPR000648 GO:0008289
Car07g01222 681 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 131 340 IPR000648 GO:0008289
Car07g01222 681 SUPERFAMILY Oxysterol-binding protein-like 384 654 IPR037239 -
Car07g01222 681 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g01222 Car-Chr7 11069054 11083104 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g01222 K20456 - gmx:100793692 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g01222 07 11069054 11083104 Car07g01222 07 11069054 11083104 ECH