LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car07g01217	ATGGCATTAACCTTGCAAACTCCGCTTTATGCAGCTGTTTCTTCCATTCCCACAAGAACATCCTTCTCCCTTCGTTCAACACCGCCACCAACTCTTCTCATCAACTACCGGAACTCCTTCCCCCGAATTCACGCTTCCTCCAATATCGACACTGCAATCACTGAATTGGATGCTGTATCCGCCTTCAGCGAGATCGTTCCAGATACCGTTATTTTCGATGATTTCCAAAAGTTTCCTCCAACTGCTGCTACTGTCAGTTCATCGCTTCTTTTGGGTATATGTGGTCTTCCAGATACTATTTTTAGGAATGCTGTGGAAATGGCTTTGGCTGATGCTGAATGTTATGGACTTGAAGATCCTAATACAAGATTATCTTGTTTCGCAACCAAGGCTTTAGTGAATGTTGGTAGTGACATGGCAAAGCTTGTCCCTGGTCGTGTTTCAACAGAAGTGGATGCCCGTCTGGCTTATGACACACATGGCATTATCAGGAAGGTGCATGACCTGTTGAAGTTGTACCATGATAGTAATGTCCCTCCTCAACGTCTTCTATTTAAAATTCCTTCAACTTGGCAAGGAATAGAGGCTGCAAGATTGCTGGAATCTGAGGGCATACAGACACATTTGACTTTTGTTTACAGCTTTGCCCAAgctgctgctgctgctcaagctggtgctTCAGTTATTCAAATTTTTGTTGGTCGTGTCAGGGACTGGGCACGTAATCATTCTGATGACCAAGAGATAGAATCTGCCAAGCTAAATGGAGAGGATCCTGGATTGGCATTGGCCGCAAAGGCTTACAACTATATTCACAAATATGGACATAAGTCAAAGTTGATGGCAGCCGCAGTCCGCAACAAGCAGGACCTATTTAGTCTTCTGGGGGTTGACTACATCATAGCTCCATTGAAGGTGTTGCAGTCTCTCAAAGAATCTGTTGCTTCTCCTGATGAGAAGTACTCTTTTGTTAGGAGGCTATCACCTCAGTCTGCTCGGAGCTACATGTTTAGTGATGAAGAGCTAATTAAATGGGACCAAATGAGCCTTGCAAATGCTATGGGGCCAGCAGCGGTGCAGCTTCTGACTGCTGGGCTAGATGGTTATGTCGATCAAGCAAAGCGGGTGGAAGATTTATTTGGGAAAATTTGGCCACCACCAAATGTATAA	1170	0.4342	MALTLQTPLYAAVSSIPTRTSFSLRSTPPPTLLINYRNSFPRIHASSNIDTAITELDAVSAFSEIVPDTVIFDDFQKFPPTAATVSSSLLLGICGLPDTIFRNAVEMALADAECYGLEDPNTRLSCFATKALVNVGSDMAKLVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYHDSNVPPQRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRVRDWARNHSDDQEIESAKLNGEDPGLALAAKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLQSLKESVASPDEKYSFVRRLSPQSARSYMFSDEELIKWDQMSLANAMGPAAVQLLTAGLDGYVDQAKRVEDLFGKIWPPPNV	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car07g01217	389	CDD	Transaldolase_TalAB	54	380	IPR004730	GO:0004801\|GO:0005737\|GO:0006098
	Car07g01217	389	Gene3D	Aldolase class I	53	382	IPR013785	-
	Car07g01217	389	PANTHER	TRANSALDOLASE	1	389	IPR001585	GO:0005975
	Car07g01217	389	PANTHER	ALDOLASE SUPERFAMILY PROTEIN	1	389	-	-
	Car07g01217	389	Pfam	Transaldolase/Fructose-6-phosphate aldolase	99	328	IPR001585	GO:0005975
	Car07g01217	389	SUPERFAMILY	Aldolase	54	384	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car07g01217	K00616		-	gmx:100789900	628.632

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car07g01217	07	11004755	11009797	Car07g01217	07	11004755	11009797	ECH